Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.49□□□□□ -1.53
USP11P51784 AL022322.2-201ENST00000624072 20397 ntBASIC5.49□□□□□ -1.53
USP11P51784 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP11P51784 TLK1P1-201ENST00000456760 2440 ntBASIC5.48□□□□□ -1.53
USP11P51784 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 Y_RNA.378-201ENST00000365652 113 ntBASIC5.48□□□□□ -1.53
USP11P51784 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP11P51784 RNU6-1032P-201ENST00000384100 107 ntBASIC5.48□□□□□ -1.53
USP11P51784 Y_RNA.476-201ENST00000384347 108 ntBASIC5.48□□□□□ -1.53
USP11P51784 MRPL42P3-201ENST00000401492 326 ntBASIC5.48□□□□□ -1.53
USP11P51784 SSXP10-201ENST00000402595 565 ntBASIC5.48□□□□□ -1.53
USP11P51784 Y_RNA.625-201ENST00000411256 107 ntBASIC5.48□□□□□ -1.53
USP11P51784 RN7SKP100-201ENST00000411258 284 ntBASIC5.48□□□□□ -1.53
USP11P51784 AL133384.1-201ENST00000412744 351 ntBASIC5.48□□□□□ -1.53
USP11P51784 RPL37P1-201ENST00000432310 284 ntBASIC5.48□□□□□ -1.53
USP11P51784 PPIAP13-201ENST00000434706 478 ntBASIC5.48□□□□□ -1.53
USP11P51784 TXNP1-201ENST00000441872 371 ntBASIC5.48□□□□□ -1.53
USP11P51784 FHP1-201ENST00000442741 703 ntBASIC5.48□□□□□ -1.53
USP11P51784 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.48□□□□□ -1.53
USP11P51784 OR1H1P-201ENST00000448731 937 ntBASIC5.48□□□□□ -1.53
USP11P51784 SUMO1P2-201ENST00000452524 304 ntBASIC5.48□□□□□ -1.53
USP11P51784 Y_RNA.653-201ENST00000459091 95 ntBASIC5.48□□□□□ -1.53
USP11P51784 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 RPL23AP41-201ENST00000484754 458 ntBASIC5.48□□□□□ -1.53
USP11P51784 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.48□□□□□ -1.53
USP11P51784 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.48□□□□□ -1.53
USP11P51784 SCARNA22-201ENST00000503991 125 ntBASIC5.48□□□□□ -1.53
USP11P51784 TXNP6-201ENST00000510190 310 ntBASIC5.48□□□□□ -1.53
USP11P51784 AC009902.1-201ENST00000519351 183 ntBASIC5.48□□□□□ -1.53
USP11P51784 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.48□□□□□ -1.53
USP11P51784 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.48□□□□□ -1.53
USP11P51784 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.48□□□□□ -1.53
USP11P51784 RN7SL802P-201ENST00000577858 299 ntBASIC5.48□□□□□ -1.53
USP11P51784 MIR5699-201ENST00000578903 90 ntBASIC5.48□□□□□ -1.53
USP11P51784 MIR3667-201ENST00000581025 74 ntBASIC5.48□□□□□ -1.53
USP11P51784 MIR4472-2-201ENST00000582069 67 ntBASIC5.48□□□□□ -1.53
USP11P51784 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.48□□□□□ -1.53
USP11P51784 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.48□□□□□ -1.53
USP11P51784 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.48□□□□□ -1.53
USP11P51784 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.48□□□□□ -1.53
USP11P51784 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.48□□□□□ -1.53
USP11P51784 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP11P51784 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.48□□□□□ -1.53
USP11P51784 DHX40P1-201ENST00000588725 1412 ntBASIC5.48□□□□□ -1.53
USP11P51784 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.48□□□□□ -1.53
USP11P51784 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 AC093775.1-201ENST00000624154 1868 ntBASIC5.47□□□□□ -1.53
USP11P51784 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
USP11P51784 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 RNA5SP191-201ENST00000362585 102 ntBASIC5.47□□□□□ -1.53
USP11P51784 RN7SKP115-201ENST00000363177 317 ntBASIC5.47□□□□□ -1.53
USP11P51784 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
USP11P51784 MCFD2P1-201ENST00000417812 300 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC018865.2-201ENST00000423631 129 ntBASIC5.47□□□□□ -1.53
USP11P51784 SKA2P1-201ENST00000425592 390 ntBASIC5.47□□□□□ -1.53
USP11P51784 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.47□□□□□ -1.53
USP11P51784 AC006466.1-201ENST00000438721 289 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC020550.1-201ENST00000447385 163 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC104058.1-201ENST00000448028 297 ntBASIC5.47□□□□□ -1.53
USP11P51784 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.47□□□□□ -1.53
USP11P51784 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.47□□□□□ -1.53
USP11P51784 MIR2053-201ENST00000459295 91 ntBASIC5.47□□□□□ -1.53
USP11P51784 U8.20-201ENST00000459445 131 ntBASIC5.47□□□□□ -1.53
USP11P51784 RPL23AP11-201ENST00000475260 469 ntBASIC5.47□□□□□ -1.53
USP11P51784 TRBV1-201ENST00000476502 284 ntBASIC5.47□□□□□ -1.53
USP11P51784 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 RPL7P43-201ENST00000478876 753 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC093267.1-201ENST00000489176 961 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC005912.1-201ENST00000495392 255 ntBASIC5.47□□□□□ -1.53
USP11P51784 TRBVA-201ENST00000498804 316 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.47□□□□□ -1.53
USP11P51784 IGKV1-32-201ENST00000519290 311 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.47□□□□□ -1.53
USP11P51784 AC109635.4-202ENST00000531666 412 ntBASIC5.47□□□□□ -1.53
USP11P51784 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.47□□□□□ -1.53
USP11P51784 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.47□□□□□ -1.53
USP11P51784 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.47□□□□□ -1.53
USP11P51784 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 AL512782.1-201ENST00000603093 364 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC103710.2-201ENST00000609912 942 ntBASIC5.47□□□□□ -1.53
USP11P51784 FAM27B-201ENST00000610601 213 ntBASIC5.47□□□□□ -1.53
USP11P51784 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
USP11P51784 AC091953.3-201ENST00000623220 236 ntBASIC5.47□□□□□ -1.53
USP11P51784 AP001784.1-201ENST00000624107 428 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms