Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF144AP50876 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF144AP50876 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
RNF144AP50876 BTBD10P1-201ENST00000549824 1352 ntBASIC5.51□□□□□ -1.53
RNF144AP50876 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF144AP50876 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF144AP50876 ZNF299P-201ENST00000406845 1804 ntBASIC5.51□□□□□ -1.53
RNF144AP50876 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RNF144AP50876 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNF144AP50876 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF144AP50876 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 Y_RNA.27-201ENST00000362540 103 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 Y_RNA.170-201ENST00000363746 110 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 RNU6-682P-201ENST00000363843 106 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 Y_RNA.439-201ENST00000384119 94 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AL109941.1-201ENST00000401925 229 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 RPL31P2-201ENST00000413849 377 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF144AP50876 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 AL159987.2-201ENST00000432754 307 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 RPL23AP22-201ENST00000437556 453 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 AL359273.1-201ENST00000510918 627 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.5□□□□□ -1.53
RNF144AP50876 RNU6-861P-201ENST00000516745 106 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 RNA5SP340-201ENST00000517132 107 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 IGKV3D-25-201ENST00000519599 235 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 IGLV3-30-201ENST00000524362 298 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AC084121.1-201ENST00000533882 835 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AC093023.1-201ENST00000547375 507 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 MIR4643-201ENST00000577473 78 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 MIR5701-3-201ENST00000578890 82 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 MIR5701-1-201ENST00000585138 82 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF144AP50876 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF144AP50876 AL121917.1-203ENST00000605534 577 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 MIR5701-2-201ENST00000615634 82 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 AC074140.1-201ENST00000621617 208 ntBASIC5.5□□□□□ -1.53
RNF144AP50876 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RNF144AP50876 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF144AP50876 AC087516.1-201ENST00000561236 2428 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RNF144AP50876 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 AC068870.1-201ENST00000563737 2455 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNF144AP50876 RNU6-1317P-201ENST00000364582 104 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 U8.8-201ENST00000365399 135 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNF144AP50876 RNU6-14P-201ENST00000384630 106 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 RPS29P13-201ENST00000402041 169 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 RPS12P17-201ENST00000438591 377 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 EEF1A1P1-201ENST00000447052 739 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 RN7SL72P-201ENST00000460697 269 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AC133134.1-201ENST00000466800 359 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AP000797.2-201ENST00000475768 606 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF144AP50876 TRBV5-2-201ENST00000489095 273 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC074198.2-201ENST00000508153 258 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AC074250.1-201ENST00000511117 192 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 snoU109.6-201ENST00000516831 118 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AC087369.1-201ENST00000520775 996 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF144AP50876 TRAV32-201ENST00000553993 340 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AL358913.1-201ENST00000554342 121 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF144AP50876 SULT1C2P2-201ENST00000562517 294 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF144AP50876 AC005951.2-201ENST00000576282 495 ntBASIC5.49□□□□□ -1.53
RNF144AP50876 MIR4300-201ENST00000581016 96 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms