Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 DHFRP3-201ENST00000455595 559 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AC099563.1-201ENST00000456086 418 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 snoU13.8-201ENST00000458890 104 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 snoU109.1-201ENST00000459339 135 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AC006463.2-201ENST00000473326 348 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AC034222.1-201ENST00000494052 532 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA1P49639 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 RNU2-46P-201ENST00000517038 113 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 RNU6-430P-201ENST00000517078 107 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 IGLVIV-65-201ENST00000517313 360 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXA1P49639 AP003467.2-201ENST00000520175 319 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 IGHV3-76-201ENST00000522465 295 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 AP000827.1-201ENST00000527814 258 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC087883.1-201ENST00000551882 391 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC063950.1-201ENST00000552036 308 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
HOXA1P49639 AL161729.4-201ENST00000604650 476 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AF250324.2-201ENST00000608299 610 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 OR10AB1P-201ENST00000609613 938 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AL355472.4-201ENST00000610233 626 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AP001506.1-201ENST00000615444 211 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AL596245.1-201ENST00000618994 362 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC012150.2-201ENST00000621300 544 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA1P49639 AL732618.1-201ENST00000623251 301 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA1P49639 AC099654.12-201ENST00000639868 649 ntBASIC3.4□□□□□ -1.87
HOXA1P49639 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA1P49639 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA1P49639 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HOXA1P49639 AC092447.10-201ENST00000620607 1652 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AL133383.2-201ENST00000622958 2336 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA1P49639 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA1P49639 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 OR5P1P-201ENST00000299512 925 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 OR4K15-201ENST00000305051 1216 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HOXA1P49639 OR5J1P-201ENST00000313544 939 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA1P49639 RNY4P24-201ENST00000362735 96 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 RNA5SP258-201ENST00000362750 119 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 RNU6-97P-201ENST00000363387 104 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HOXA1P49639 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA1P49639 FCF1P10-201ENST00000407590 479 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 MIR548F1-201ENST00000408667 84 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 Z74696.2-201ENST00000436514 498 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AL138799.3-201ENST00000438968 350 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 RPL23AP33-201ENST00000442301 452 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 AL513533.1-201ENST00000453728 415 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC104308.1-201ENST00000454621 333 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA1P49639 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 RN7SL826P-201ENST00000479724 288 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 NDUFA5P12-201ENST00000503796 343 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXA1P49639 COX7A2P2-201ENST00000505291 250 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 AC022616.6-201ENST00000520479 119 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 OR8L1P-201ENST00000534005 955 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA1P49639 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXA1P49639 ZNF192P1-203ENST00000565888 810 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC090615.1-201ENST00000577519 154 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 MIR4436B2-201ENST00000581415 91 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 MIR4436B1-201ENST00000583272 91 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AL669831.4-202ENST00000590817 238 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA1P49639 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA1P49639 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA1P49639 AL354984.3-201ENST00000604803 325 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC055876.5-201ENST00000605667 259 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 HMGN2P28-201ENST00000606102 262 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC091304.9-201ENST00000612091 226 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AL590099.1-201ENST00000615276 138 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 uc_338.13-201ENST00000618243 179 ntBASIC3.39□□□□□ -1.87
HOXA1P49639 AC095031.1-201ENST00000623685 672 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms