Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL357080.1-201ENST00000617394 239 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AL049780.3-201ENST00000624612 1583 ntBASIC3.57□□□□□ -1.84
LHX1P48742 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.57□□□□□ -1.84
LHX1P48742 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LHX1P48742 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
LHX1P48742 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
LHX1P48742 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LHX1P48742 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 AC073346.2-201ENST00000624724 2058 ntBASIC3.56□□□□□ -1.84
LHX1P48742 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.56□□□□□ -1.84
LHX1P48742 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 RNU6-28P-201ENST00000362378 107 ntBASIC3.56□□□□□ -1.84
LHX1P48742 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
LHX1P48742 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 AC009237.5-201ENST00000414271 501 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.56□□□□□ -1.84
LHX1P48742 TOMM22P1-201ENST00000418578 312 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC005300.1-201ENST00000428401 373 ntBASIC3.56□□□□□ -1.84
LHX1P48742 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 SDCBPP1-201ENST00000440192 890 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AC098826.2-201ENST00000452011 651 ntBASIC3.56□□□□□ -1.84
LHX1P48742 BX322784.1-201ENST00000455793 1077 ntBASIC3.56□□□□□ -1.84
LHX1P48742 RNU7-170P-201ENST00000459303 61 ntBASIC3.56□□□□□ -1.84
LHX1P48742 RPL31P50-201ENST00000471002 296 ntBASIC3.56□□□□□ -1.84
LHX1P48742 ST13P14-201ENST00000474095 734 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 AC020893.1-201ENST00000502452 580 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC110794.1-201ENST00000505816 425 ntBASIC3.56□□□□□ -1.84
LHX1P48742 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.56□□□□□ -1.84
LHX1P48742 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LHX1P48742 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 MTCYBP43-201ENST00000513621 740 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
LHX1P48742 RNA5SP216-201ENST00000516111 123 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 UBTFL10-201ENST00000528532 562 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AP004242.1-201ENST00000533701 349 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AC126177.3-201ENST00000551839 688 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AC015917.1-201ENST00000579654 510 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.56□□□□□ -1.84
LHX1P48742 AL133507.1-201ENST00000605269 557 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AL390208.1-201ENST00000605885 644 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC131159.1-201ENST00000621854 213 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AC097520.1-201ENST00000624435 385 ntBASIC3.56□□□□□ -1.84
LHX1P48742 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.56□□□□□ -1.84
LHX1P48742 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LHX1P48742 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LHX1P48742 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 AP000526.1-201ENST00000603308 1388 ntBASIC3.55□□□□□ -1.84
LHX1P48742 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 RNA5SP387-201ENST00000364226 106 ntBASIC3.55□□□□□ -1.84
LHX1P48742 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.55□□□□□ -1.84
LHX1P48742 RNU6-1200P-201ENST00000384162 107 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RNU6-253P-201ENST00000384730 105 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RAP1BP1-201ENST00000412709 553 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RAD23BP2-201ENST00000416003 1207 ntBASIC3.55□□□□□ -1.84
LHX1P48742 MTCO3P12-201ENST00000416718 547 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC098592.1-201ENST00000419352 333 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC083875.1-201ENST00000419509 405 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.55□□□□□ -1.84
LHX1P48742 AL035407.1-201ENST00000429211 571 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.55□□□□□ -1.84
LHX1P48742 EZH2P1-201ENST00000431167 291 ntBASIC3.55□□□□□ -1.84
LHX1P48742 MTND4LP10-201ENST00000435146 291 ntBASIC3.55□□□□□ -1.84
LHX1P48742 MUPP-201ENST00000438111 566 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.55□□□□□ -1.84
LHX1P48742 AL591503.2-201ENST00000442314 1005 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
LHX1P48742 HMGB1P15-201ENST00000453854 435 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.55□□□□□ -1.84
LHX1P48742 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
LHX1P48742 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.55□□□□□ -1.84
LHX1P48742 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
LHX1P48742 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
LHX1P48742 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.55□□□□□ -1.84
LHX1P48742 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.55□□□□□ -1.84
LHX1P48742 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 OR6C7P-201ENST00000547875 934 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC090888.2-201ENST00000559765 1144 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC002400.1-201ENST00000569310 726 ntBASIC3.55□□□□□ -1.84
LHX1P48742 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.55□□□□□ -1.84
LHX1P48742 NIFKP6-201ENST00000598115 845 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms