Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD12P35452 MIR3690-201ENST00000580266 75 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXD12P35452 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXD12P35452 BBIP1P1-201ENST00000602999 279 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 AC024220.1-201ENST00000603675 484 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD12P35452 AC040168.1-201ENST00000623594 991 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 AL603839.4-201ENST00000624658 1005 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXD12P35452 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HOXD12P35452 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD12P35452 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXD12P35452 AC066616.2-201ENST00000559334 1481 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXD12P35452 AC006378.2-201ENST00000623178 2476 ntBASIC4.21□□□□□ -1.74
HOXD12P35452 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXD12P35452 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
HOXD12P35452 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXD12P35452 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXD12P35452 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXD12P35452 MIR423-201ENST00000362201 94 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 RNU1-63P-201ENST00000383902 164 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 Y_RNA.516-201ENST00000384541 124 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 RNU6-878P-201ENST00000384578 110 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 Y_RNA.598-201ENST00000410480 95 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 JKAMPP1-201ENST00000413804 919 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 USP9YP13-201ENST00000417797 480 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 TOMM22P1-201ENST00000418578 312 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 Z74021.1-201ENST00000423610 407 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AC010975.2-201ENST00000427781 588 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 AL031667.1-201ENST00000440222 725 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 snoU109.4-201ENST00000458953 143 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 RN7SKP244-201ENST00000516513 307 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 PAICSP4-201ENST00000517543 1253 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 OR5AP1P-201ENST00000529730 940 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 OR4P1P-201ENST00000530808 1136 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 EEF1B2P4-201ENST00000551398 348 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD12P35452 BNIP3P8-201ENST00000597863 560 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AL354984.3-201ENST00000604803 325 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AC055876.5-201ENST00000605667 259 ntBASIC4.2□□□□□ -1.74
HOXD12P35452 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD12P35452 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD12P35452 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 RNA5SP322-201ENST00000363617 119 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RNU6-809P-201ENST00000384461 107 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RPL17P50-201ENST00000396131 546 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD12P35452 AL445669.1-201ENST00000426743 755 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 AC109583.1-201ENST00000432156 268 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 OR2B8P-201ENST00000432841 938 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RPS29P7-201ENST00000439662 171 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 HSPE1P28-201ENST00000443139 211 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC002381.1-201ENST00000447049 280 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC005297.2-201ENST00000450430 606 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AL590365.1-201ENST00000450788 243 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AL033528.1-201ENST00000453780 140 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 BTF3P5-201ENST00000457252 467 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 CEACAMP4-201ENST00000457676 421 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RPL35AP15-201ENST00000468042 339 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RPL9P33-201ENST00000484311 566 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 HMGB1P22-201ENST00000505315 124 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 MTND2P33-201ENST00000506452 1031 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD12P35452 RPL37P25-201ENST00000507308 276 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD12P35452 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD12P35452 RN7SKP298-201ENST00000515950 94 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
HOXD12P35452 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD12P35452 COX6CP8-201ENST00000522620 226 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms