Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC074029.1-201ENST00000552531 1044 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.44□□□□□ -1.86
USP6P35125 AC010620.2-201ENST00000600135 313 ntBASIC3.44□□□□□ -1.86
USP6P35125 AP003117.2-201ENST00000606010 545 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC103810.6-201ENST00000606708 136 ntBASIC3.44□□□□□ -1.86
USP6P35125 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USP6P35125 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.44□□□□□ -1.86
USP6P35125 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 RNU6-236P-201ENST00000363886 106 ntBASIC3.44□□□□□ -1.86
USP6P35125 Y_RNA.238-201ENST00000364441 102 ntBASIC3.44□□□□□ -1.86
USP6P35125 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL359511.1-201ENST00000402970 211 ntBASIC3.44□□□□□ -1.86
USP6P35125 BTBD10P2-201ENST00000404779 676 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.44□□□□□ -1.86
USP6P35125 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.44□□□□□ -1.86
USP6P35125 BTF3P8-201ENST00000414577 526 ntBASIC3.44□□□□□ -1.86
USP6P35125 RPS15AP40-201ENST00000419621 391 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.44□□□□□ -1.86
USP6P35125 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.44□□□□□ -1.86
USP6P35125 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.44□□□□□ -1.86
USP6P35125 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 MTATP6P14-201ENST00000455189 673 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.44□□□□□ -1.86
USP6P35125 RPS15AP1-201ENST00000457423 391 ntBASIC3.44□□□□□ -1.86
USP6P35125 AP000893.1-201ENST00000474462 794 ntBASIC3.44□□□□□ -1.86
USP6P35125 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.44□□□□□ -1.86
USP6P35125 AC234781.5-201ENST00000508429 271 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC109471.1-201ENST00000511631 612 ntBASIC3.44□□□□□ -1.86
USP6P35125 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP6P35125 snoZ278.1-201ENST00000517059 112 ntBASIC3.44□□□□□ -1.86
USP6P35125 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
USP6P35125 AC019227.1-201ENST00000526902 510 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC118942.1-201ENST00000529674 1035 ntBASIC3.44□□□□□ -1.86
USP6P35125 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.44□□□□□ -1.86
USP6P35125 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.44□□□□□ -1.86
USP6P35125 AC087897.1-201ENST00000550134 156 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.44□□□□□ -1.86
USP6P35125 YWHAZP1-201ENST00000556286 722 ntBASIC3.44□□□□□ -1.86
USP6P35125 AGGF1P8-201ENST00000562979 1000 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC010928.3-201ENST00000587712 541 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL606834.3-201ENST00000602615 496 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC002487.1-201ENST00000604565 994 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC018754.1-201ENST00000607486 925 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC022306.3-201ENST00000619930 550 ntBASIC3.44□□□□□ -1.86
USP6P35125 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.44□□□□□ -1.86
USP6P35125 AC099654.8-201ENST00000637757 681 ntBASIC3.44□□□□□ -1.86
USP6P35125 MTND4P9-201ENST00000507819 1346 ntBASIC3.44□□□□□ -1.86
USP6P35125 AL139811.1-201ENST00000424779 2299 ntBASIC3.43□□□□□ -1.86
USP6P35125 AC016717.2-201ENST00000609089 5141 ntBASIC3.43□□□□□ -1.86
USP6P35125 MTCO1P9-201ENST00000505577 1534 ntBASIC3.43□□□□□ -1.86
USP6P35125 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.43□□□□□ -1.86
USP6P35125 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP6P35125 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
USP6P35125 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP6P35125 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.43□□□□□ -1.86
USP6P35125 AL590004.2-201ENST00000404787 371 ntBASIC3.43□□□□□ -1.86
USP6P35125 RNA5SP425-201ENST00000410336 112 ntBASIC3.43□□□□□ -1.86
USP6P35125 NUP35P2-201ENST00000416748 943 ntBASIC3.43□□□□□ -1.86
USP6P35125 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.43□□□□□ -1.86
USP6P35125 HSFY7P-201ENST00000432672 318 ntBASIC3.43□□□□□ -1.86
USP6P35125 HSFY8P-201ENST00000437934 318 ntBASIC3.43□□□□□ -1.86
USP6P35125 HSFY5P-201ENST00000453726 309 ntBASIC3.43□□□□□ -1.86
USP6P35125 FCF1P6-201ENST00000456841 595 ntBASIC3.43□□□□□ -1.86
USP6P35125 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.43□□□□□ -1.86
USP6P35125 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.43□□□□□ -1.86
USP6P35125 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.43□□□□□ -1.86
USP6P35125 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.43□□□□□ -1.86
USP6P35125 SNORA19.3-201ENST00000516165 130 ntBASIC3.43□□□□□ -1.86
USP6P35125 RN7SKP277-201ENST00000516895 283 ntBASIC3.43□□□□□ -1.86
USP6P35125 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
USP6P35125 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.43□□□□□ -1.86
USP6P35125 PDCL2P2-201ENST00000533651 189 ntBASIC3.43□□□□□ -1.86
USP6P35125 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.43□□□□□ -1.86
USP6P35125 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP6P35125 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
USP6P35125 AC079228.1-201ENST00000624774 1049 ntBASIC3.43□□□□□ -1.86
USP6P35125 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.43□□□□□ -1.86
USP6P35125 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.43□□□□□ -1.86
USP6P35125 AC013437.2-201ENST00000639587 677 ntBASIC3.43□□□□□ -1.86
USP6P35125 AC009452.1-201ENST00000640823 606 ntBASIC3.43□□□□□ -1.86
USP6P35125 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.43□□□□□ -1.86
USP6P35125 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.43□□□□□ -1.86
USP6P35125 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.42□□□□□ -1.86
USP6P35125 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP6P35125 PNPT1P2-201ENST00000456768 2050 ntBASIC3.42□□□□□ -1.86
USP6P35125 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
USP6P35125 RNU6-619P-201ENST00000365146 108 ntBASIC3.42□□□□□ -1.86
USP6P35125 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
USP6P35125 MTCO2P31-201ENST00000402702 684 ntBASIC3.42□□□□□ -1.86
USP6P35125 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP6P35125 AC027644.1-201ENST00000419595 298 ntBASIC3.42□□□□□ -1.86
USP6P35125 AL354692.1-201ENST00000423044 315 ntBASIC3.42□□□□□ -1.86
USP6P35125 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.42□□□□□ -1.86
USP6P35125 MTCO1P39-201ENST00000426148 480 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms