Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SNORA40.18-201ENST00000391200 128 ntBASIC2.98□□□□□ -1.93
CLIP1P30622 LUZP4P1-201ENST00000415420 344 ntBASIC2.98□□□□□ -1.93
CLIP1P30622 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP1P30622 snoZ278.1-201ENST00000517059 112 ntBASIC2.98□□□□□ -1.93
CLIP1P30622 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP1P30622 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP1P30622 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP1P30622 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLIP1P30622 AC068790.3-201ENST00000602988 553 ntBASIC2.98□□□□□ -1.93
CLIP1P30622 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP1P30622 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLIP1P30622 VTRNA1-1-201ENST00000363120 99 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 SET-203ENST00000372688 801 ntTSL 2 BASIC2.97□□□□□ -1.93
CLIP1P30622 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP1P30622 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 NDUFB4P6-201ENST00000436819 366 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 SNRPFP2-201ENST00000440710 251 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 ARPC3P2-201ENST00000457786 533 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 SNORD13-201ENST00000459299 104 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 AP000926.3-201ENST00000497201 299 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.97□□□□□ -1.93
CLIP1P30622 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.97□□□□□ -1.93
CLIP1P30622 MIR3683-201ENST00000580847 82 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 PSMA6P4-201ENST00000603247 718 ntBASIC2.97□□□□□ -1.93
CLIP1P30622 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP1P30622 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLIP1P30622 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLIP1P30622 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP1P30622 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP1P30622 EIF1AXP1-201ENST00000419267 435 ntBASIC2.96□□□□□ -1.94
CLIP1P30622 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP1P30622 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP1P30622 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP1P30622 AC108729.3-201ENST00000513484 108 ntBASIC2.96□□□□□ -1.94
CLIP1P30622 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP1P30622 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.96□□□□□ -1.94
CLIP1P30622 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP1P30622 AC005156.1-201ENST00000613371 573 ntBASIC2.96□□□□□ -1.94
CLIP1P30622 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP1P30622 AC080128.1-201ENST00000474389 1917 ntBASIC2.96□□□□□ -1.94
CLIP1P30622 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLIP1P30622 RPL23AP36-201ENST00000413895 458 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 AC109583.1-201ENST00000432156 268 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 AP000873.1-201ENST00000463987 400 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 AC098583.1-201ENST00000480875 255 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 AC012170.1-201ENST00000495139 359 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 RPL23AP78-201ENST00000599928 470 ntBASIC2.95□□□□□ -1.94
CLIP1P30622 METTL21EP-201ENST00000298105 713 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLIP1P30622 RNA5SP138-201ENST00000365098 114 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLIP1P30622 AC099336.2-201ENST00000422457 254 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 RPS26P30-201ENST00000443431 335 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP1P30622 MTCO1P30-201ENST00000515244 580 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.94□□□□□ -1.94
CLIP1P30622 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP1P30622 MIR4255-201ENST00000579351 72 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 AC084768.2-201ENST00000622736 221 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 AL121594.5-201ENST00000631724 573 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP1P30622 MIR4278-201ENST00000636094 69 ntBASIC2.94□□□□□ -1.94
CLIP1P30622 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLIP1P30622 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP1P30622 MIR1294-201ENST00000408503 142 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 MTCO1P43-201ENST00000431831 488 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 RPL23AP20-201ENST00000447965 421 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 HMGN1P28-201ENST00000521340 364 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 RPP40P2-201ENST00000603596 712 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 snoU13.31-201ENST00000607291 104 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP1P30622 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.93□□□□□ -1.94
CLIP1P30622 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLIP1P30622 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLIP1P30622 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CLIP1P30622 RNA5SP190-201ENST00000365222 118 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AL627390.1-201ENST00000396055 340 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC079804.2-201ENST00000490376 200 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC090255.1-201ENST00000495779 349 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP1P30622 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.93□□□□□ -1.94
CLIP1P30622 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP1P30622 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP1P30622 AP004372.1-201ENST00000604842 844 ntBASIC2.93□□□□□ -1.94
CLIP1P30622 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
CLIP1P30622 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP1P30622 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLIP1P30622 AL513331.1-201ENST00000411908 397 ntBASIC2.92□□□□□ -1.94
CLIP1P30622 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP1P30622 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms