Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Z75746.1-201ENST00000440243 2080 ntBASIC5.91□□□□□ -1.46
VARSP26640 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 MIR323A-201ENST00000362199 86 ntBASIC5.91□□□□□ -1.46
VARSP26640 SNORD81.1-201ENST00000363064 77 ntBASIC5.91□□□□□ -1.46
VARSP26640 Y_RNA.533-201ENST00000384596 114 ntBASIC5.91□□□□□ -1.46
VARSP26640 SNORA17A-201ENST00000391185 133 ntBASIC5.91□□□□□ -1.46
VARSP26640 RNU4-65P-201ENST00000410473 140 ntBASIC5.91□□□□□ -1.46
VARSP26640 BX842559.1-201ENST00000419615 532 ntBASIC5.91□□□□□ -1.46
VARSP26640 AL445305.1-201ENST00000432577 575 ntBASIC5.91□□□□□ -1.46
VARSP26640 AL513124.1-201ENST00000450410 614 ntBASIC5.91□□□□□ -1.46
VARSP26640 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.91□□□□□ -1.46
VARSP26640 SCARNA24.2-201ENST00000516968 130 ntBASIC5.91□□□□□ -1.46
VARSP26640 AF186190.1-201ENST00000517470 480 ntBASIC5.91□□□□□ -1.46
VARSP26640 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.91□□□□□ -1.46
VARSP26640 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.91□□□□□ -1.46
VARSP26640 AC092121.1-201ENST00000569452 202 ntBASIC5.91□□□□□ -1.46
VARSP26640 MIR4643-201ENST00000577473 78 ntBASIC5.91□□□□□ -1.46
VARSP26640 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.91□□□□□ -1.46
VARSP26640 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 AL158827.2-201ENST00000602494 330 ntBASIC5.91□□□□□ -1.46
VARSP26640 MIR6768-201ENST00000610734 72 ntBASIC5.91□□□□□ -1.46
VARSP26640 AC092266.1-201ENST00000610958 165 ntBASIC5.91□□□□□ -1.46
VARSP26640 MIR376A1-201ENST00000616574 68 ntBASIC5.91□□□□□ -1.46
VARSP26640 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.91□□□□□ -1.46
VARSP26640 SNORA17.5-201ENST00000630429 132 ntBASIC5.91□□□□□ -1.46
VARSP26640 AL691447.3-201ENST00000635020 330 ntBASIC5.91□□□□□ -1.46
VARSP26640 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VARSP26640 AL359893.1-201ENST00000447628 1580 ntBASIC5.91□□□□□ -1.46
VARSP26640 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARSP26640 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 AP000560.1-201ENST00000624150 1937 ntBASIC5.91□□□□□ -1.46
VARSP26640 AC093849.1-201ENST00000563631 2209 ntBASIC5.91□□□□□ -1.46
VARSP26640 AC005183.1-201ENST00000603687 1979 ntBASIC5.91□□□□□ -1.46
VARSP26640 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARSP26640 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VARSP26640 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.9□□□□□ -1.46
VARSP26640 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARSP26640 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
VARSP26640 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VARSP26640 SNORD1C-201ENST00000363315 78 ntBASIC5.9□□□□□ -1.46
VARSP26640 Y_RNA.458-201ENST00000384240 102 ntBASIC5.9□□□□□ -1.46
VARSP26640 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VARSP26640 SNORD115-46-201ENST00000390982 71 ntBASIC5.9□□□□□ -1.46
VARSP26640 Y_RNA.592-201ENST00000410274 109 ntBASIC5.9□□□□□ -1.46
VARSP26640 RNU2-20P-201ENST00000410425 191 ntBASIC5.9□□□□□ -1.46
VARSP26640 AL160275.3-201ENST00000423876 471 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC073063.1-201ENST00000434352 607 ntBASIC5.9□□□□□ -1.46
VARSP26640 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.9□□□□□ -1.46
VARSP26640 HMGN2P13-201ENST00000476476 274 ntBASIC5.9□□□□□ -1.46
VARSP26640 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 VN1R105P-201ENST00000486595 910 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC090958.1-201ENST00000511122 351 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 RNA5SP434-201ENST00000516647 121 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 AC090151.1-201ENST00000520784 730 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 CYCSP38-201ENST00000559840 322 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 MRPS21P8-201ENST00000569196 235 ntBASIC5.9□□□□□ -1.46
VARSP26640 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 OR1M4P-201ENST00000589199 287 ntBASIC5.9□□□□□ -1.46
VARSP26640 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 MIR3976-201ENST00000606807 139 ntBASIC5.9□□□□□ -1.46
VARSP26640 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.9□□□□□ -1.46
VARSP26640 AC093799.2-201ENST00000610062 578 ntBASIC5.9□□□□□ -1.46
VARSP26640 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.9□□□□□ -1.46
VARSP26640 FP236240.3-201ENST00000623061 327 ntBASIC5.9□□□□□ -1.46
VARSP26640 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VARSP26640 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
VARSP26640 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.9□□□□□ -1.47
VARSP26640 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VARSP26640 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
VARSP26640 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VARSP26640 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.9□□□□□ -1.47
VARSP26640 AP001148.1-201ENST00000624124 2359 ntBASIC5.89□□□□□ -1.47
VARSP26640 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VARSP26640 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VARSP26640 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARSP26640 AC138907.8-201ENST00000623981 2256 ntBASIC5.89□□□□□ -1.47
VARSP26640 RNA5SP510-201ENST00000364697 99 ntBASIC5.89□□□□□ -1.47
VARSP26640 AL590704.1-201ENST00000402856 794 ntBASIC5.89□□□□□ -1.47
VARSP26640 RNU6-325P-201ENST00000411132 105 ntBASIC5.89□□□□□ -1.47
VARSP26640 RN7SKP17-201ENST00000411242 351 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms