Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.58□□□□□ -1.68
XPAP23025 BNIP3P2-201ENST00000441221 577 ntBASIC4.58□□□□□ -1.68
XPAP23025 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.58□□□□□ -1.68
XPAP23025 Z95327.1-201ENST00000446082 482 ntBASIC4.58□□□□□ -1.68
XPAP23025 AL590399.6-201ENST00000446396 307 ntBASIC4.58□□□□□ -1.68
XPAP23025 NANOGP10-201ENST00000453325 895 ntBASIC4.58□□□□□ -1.68
XPAP23025 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
XPAP23025 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.58□□□□□ -1.68
XPAP23025 CYCSP34-201ENST00000458172 304 ntBASIC4.58□□□□□ -1.68
XPAP23025 SNORD121B-201ENST00000458838 81 ntBASIC4.58□□□□□ -1.68
XPAP23025 AC083798.1-201ENST00000472671 131 ntBASIC4.58□□□□□ -1.68
XPAP23025 AL139099.1-201ENST00000497398 403 ntBASIC4.58□□□□□ -1.68
XPAP23025 HMGN1P12-201ENST00000499125 195 ntBASIC4.58□□□□□ -1.68
XPAP23025 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
XPAP23025 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.58□□□□□ -1.68
XPAP23025 AC114786.4-201ENST00000508771 728 ntBASIC4.58□□□□□ -1.68
XPAP23025 RNU6-835P-201ENST00000516974 104 ntBASIC4.58□□□□□ -1.68
XPAP23025 RNU4-60P-201ENST00000517239 135 ntBASIC4.58□□□□□ -1.68
XPAP23025 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 OR4R3P-201ENST00000525084 838 ntBASIC4.58□□□□□ -1.68
XPAP23025 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.58□□□□□ -1.68
XPAP23025 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 AC084783.1-201ENST00000565846 910 ntBASIC4.58□□□□□ -1.68
XPAP23025 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.58□□□□□ -1.68
XPAP23025 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.58□□□□□ -1.68
XPAP23025 FGF7P1-201ENST00000582820 288 ntBASIC4.58□□□□□ -1.68
XPAP23025 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 KC877982.1-201ENST00000602313 470 ntBASIC4.58□□□□□ -1.68
XPAP23025 AC006329.2-201ENST00000611491 394 ntBASIC4.58□□□□□ -1.68
XPAP23025 AC245517.5-201ENST00000611529 162 ntBASIC4.58□□□□□ -1.68
XPAP23025 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 MIR8069-1-201ENST00000616627 86 ntBASIC4.58□□□□□ -1.68
XPAP23025 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 MIR8069-2-201ENST00000621412 86 ntBASIC4.58□□□□□ -1.68
XPAP23025 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.58□□□□□ -1.68
XPAP23025 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
XPAP23025 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.58□□□□□ -1.68
XPAP23025 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
XPAP23025 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
XPAP23025 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
XPAP23025 ZNF680P1-201ENST00000436625 1469 ntBASIC4.57□□□□□ -1.68
XPAP23025 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 AC126323.6-202ENST00000568092 3511 ntBASIC4.57□□□□□ -1.68
XPAP23025 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 OR1S2-201ENST00000302592 978 ntBASIC4.57□□□□□ -1.68
XPAP23025 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 CBX3P1-201ENST00000325243 554 ntBASIC4.57□□□□□ -1.68
XPAP23025 RNU6-1120P-201ENST00000362988 108 ntBASIC4.57□□□□□ -1.68
XPAP23025 RNY1P12-201ENST00000364251 105 ntBASIC4.57□□□□□ -1.68
XPAP23025 RNU6-108P-201ENST00000365558 107 ntBASIC4.57□□□□□ -1.68
XPAP23025 RNU6-39P-201ENST00000384344 107 ntBASIC4.57□□□□□ -1.68
XPAP23025 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
XPAP23025 RNU2-47P-201ENST00000410649 186 ntBASIC4.57□□□□□ -1.68
XPAP23025 RNU2-41P-201ENST00000410991 178 ntBASIC4.57□□□□□ -1.68
XPAP23025 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.57□□□□□ -1.68
XPAP23025 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.57□□□□□ -1.68
XPAP23025 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.57□□□□□ -1.68
XPAP23025 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
XPAP23025 GPR143P-201ENST00000434155 205 ntBASIC4.57□□□□□ -1.68
XPAP23025 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.57□□□□□ -1.68
XPAP23025 RPL21P89-201ENST00000444021 467 ntBASIC4.57□□□□□ -1.68
XPAP23025 MTCO2P29-201ENST00000465212 189 ntBASIC4.57□□□□□ -1.68
XPAP23025 RPL21P126-201ENST00000470049 478 ntBASIC4.57□□□□□ -1.68
XPAP23025 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 AC093840.1-201ENST00000511599 336 ntBASIC4.57□□□□□ -1.68
XPAP23025 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 RN7SKP46-201ENST00000515942 234 ntBASIC4.57□□□□□ -1.68
XPAP23025 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 IGLVIV-65-201ENST00000517313 360 ntBASIC4.57□□□□□ -1.68
XPAP23025 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 AP003072.2-201ENST00000527756 676 ntBASIC4.57□□□□□ -1.68
XPAP23025 AC009643.1-201ENST00000532030 391 ntBASIC4.57□□□□□ -1.68
XPAP23025 RAB11AP2-201ENST00000545905 639 ntBASIC4.57□□□□□ -1.68
XPAP23025 GSTP1P1-201ENST00000548078 319 ntBASIC4.57□□□□□ -1.68
XPAP23025 CBX3P5-201ENST00000552017 521 ntBASIC4.57□□□□□ -1.68
XPAP23025 OR4T1P-201ENST00000554933 911 ntBASIC4.57□□□□□ -1.68
XPAP23025 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.57□□□□□ -1.68
XPAP23025 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
XPAP23025 C8orf59P2-201ENST00000603441 271 ntBASIC4.57□□□□□ -1.68
XPAP23025 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XPAP23025 uc_338.12-201ENST00000616344 181 ntBASIC4.57□□□□□ -1.68
XPAP23025 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.57□□□□□ -1.68
XPAP23025 U73479.1-201ENST00000618062 168 ntBASIC4.57□□□□□ -1.68
XPAP23025 AC022106.2-201ENST00000620114 757 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms