Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 RNU6-1188P-201ENST00000363795 107 ntBASIC5.92□□□□□ -1.46
RFX1P22670 SNORA22B-201ENST00000383876 138 ntBASIC5.92□□□□□ -1.46
RFX1P22670 SSXP9-201ENST00000417503 292 ntBASIC5.92□□□□□ -1.46
RFX1P22670 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.92□□□□□ -1.46
RFX1P22670 VTI1BP4-201ENST00000427516 527 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX1P22670 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX1P22670 CYCSP24-201ENST00000445119 316 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX1P22670 AL591623.2-201ENST00000449978 222 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AP002812.1-201ENST00000495378 474 ntBASIC5.92□□□□□ -1.46
RFX1P22670 RPS27AP13-201ENST00000498403 237 ntBASIC5.92□□□□□ -1.46
RFX1P22670 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 AC104136.1-201ENST00000512969 394 ntBASIC5.92□□□□□ -1.46
RFX1P22670 SNORA14.1-201ENST00000516113 141 ntBASIC5.92□□□□□ -1.46
RFX1P22670 Y_RNA.689-201ENST00000516589 107 ntBASIC5.92□□□□□ -1.46
RFX1P22670 RNU6-1069P-201ENST00000516612 133 ntBASIC5.92□□□□□ -1.46
RFX1P22670 RN7SKP60-201ENST00000516985 239 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX1P22670 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX1P22670 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX1P22670 MIR4458-201ENST00000578872 75 ntBASIC5.92□□□□□ -1.46
RFX1P22670 RN7SL708P-201ENST00000580952 299 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 AC012616.1-201ENST00000600294 197 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AL049539.1-201ENST00000611964 459 ntBASIC5.92□□□□□ -1.46
RFX1P22670 SDR42E1P2-201ENST00000614861 481 ntBASIC5.92□□□□□ -1.46
RFX1P22670 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 AC093849.1-201ENST00000563631 2209 ntBASIC5.92□□□□□ -1.46
RFX1P22670 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.92□□□□□ -1.46
RFX1P22670 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
RFX1P22670 AC007823.1-201ENST00000569932 1566 ntBASIC5.92□□□□□ -1.46
RFX1P22670 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX1P22670 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RFX1P22670 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RFX1P22670 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 AC104964.3-201ENST00000606115 2860 ntBASIC5.91□□□□□ -1.46
RFX1P22670 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 Y_RNA.31-201ENST00000362574 102 ntBASIC5.91□□□□□ -1.46
RFX1P22670 RNU6-128P-201ENST00000383976 107 ntBASIC5.91□□□□□ -1.46
RFX1P22670 RNU6-76P-201ENST00000384060 104 ntBASIC5.91□□□□□ -1.46
RFX1P22670 RNU6-190P-201ENST00000384154 102 ntBASIC5.91□□□□□ -1.46
RFX1P22670 RPLP0P7-201ENST00000416050 667 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.91□□□□□ -1.46
RFX1P22670 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 MTND3P2-201ENST00000438452 342 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC006466.1-201ENST00000438721 289 ntBASIC5.91□□□□□ -1.46
RFX1P22670 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 AC008264.1-201ENST00000447612 367 ntBASIC5.91□□□□□ -1.46
RFX1P22670 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 Y_RNA.653-201ENST00000459091 95 ntBASIC5.91□□□□□ -1.46
RFX1P22670 RNU6-953P-201ENST00000459154 107 ntBASIC5.91□□□□□ -1.46
RFX1P22670 VN1R105P-201ENST00000486595 910 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC072052.1-201ENST00000496556 306 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC008526.1-201ENST00000509149 338 ntBASIC5.91□□□□□ -1.46
RFX1P22670 MTCYBP40-201ENST00000509390 1135 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 RNU2-69P-201ENST00000516061 100 ntBASIC5.91□□□□□ -1.46
RFX1P22670 SNORA31.22-201ENST00000517204 135 ntBASIC5.91□□□□□ -1.46
RFX1P22670 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC090151.1-201ENST00000520784 730 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.91□□□□□ -1.46
RFX1P22670 AL121603.1-201ENST00000553815 142 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 AC019322.1-201ENST00000571869 389 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX1P22670 AC136443.5-201ENST00000603741 370 ntBASIC5.91□□□□□ -1.46
RFX1P22670 MTND5P42-201ENST00000637720 498 ntBASIC5.91□□□□□ -1.46
RFX1P22670 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 AC073869.8-201ENST00000641806 335 ntBASIC5.91□□□□□ -1.46
RFX1P22670 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.91□□□□□ -1.46
RFX1P22670 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 ZNF519P1-201ENST00000449011 1626 ntBASIC5.91□□□□□ -1.46
RFX1P22670 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX1P22670 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX1P22670 MTND5P10-201ENST00000603719 1809 ntBASIC5.9□□□□□ -1.46
RFX1P22670 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.9□□□□□ -1.46
RFX1P22670 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFX1P22670 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms