Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SET-203ENST00000372688 801 ntTSL 2 BASIC1.97□□□□□ -2.09
HMGA1P17096 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HMGA1P17096 RPL19P1-201ENST00000411635 428 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGA1P17096 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGA1P17096 ZYG11AP1-201ENST00000430329 837 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGA1P17096 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGA1P17096 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGA1P17096 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGA1P17096 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGA1P17096 SYF2P1-201ENST00000550658 413 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 AC002984.1-201ENST00000591692 448 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGA1P17096 AC091057.2-201ENST00000602594 792 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 AC011890.2-201ENST00000613393 294 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMGA1P17096 ZNF72P-201ENST00000425869 1908 ntBASIC1.97□□□□□ -2.09
HMGA1P17096 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
HMGA1P17096 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGA1P17096 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 RNA5SP213-201ENST00000391031 106 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGA1P17096 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGA1P17096 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGA1P17096 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.96□□□□□ -2.1
HMGA1P17096 AL603825.1-201ENST00000438481 80 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 RPS3AP23-202ENST00000574601 686 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.96□□□□□ -2.1
HMGA1P17096 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGA1P17096 RPL23AP88-201ENST00000605759 454 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 AC068722.2-201ENST00000618734 544 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 AC002064.3-201ENST00000623448 346 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGA1P17096 AP002907.1-201ENST00000606361 1430 ntBASIC1.96□□□□□ -2.1
HMGA1P17096 RNU6-1159P-201ENST00000362933 107 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGA1P17096 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGA1P17096 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 AC023128.2-201ENST00000420880 1223 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGA1P17096 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
HMGA1P17096 AC010683.1-201ENST00000473673 378 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 RPL21P131-201ENST00000497298 483 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 AIG1P1-201ENST00000503376 148 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 RN7SKP244-201ENST00000516513 307 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGA1P17096 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGA1P17096 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGA1P17096 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 ISCA1P3-201ENST00000577104 373 ntBASIC1.95□□□□□ -2.1
HMGA1P17096 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGA1P17096 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 DCAF13P1-201ENST00000495256 1330 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 HSPA8P4-201ENST00000511877 1920 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 MORF4L1P6-201ENST00000418771 268 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.94□□□□□ -2.1
HMGA1P17096 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGA1P17096 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 XKRYP6-201ENST00000440468 1116 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 XKRYP3-201ENST00000442113 1116 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 HSFY3P-201ENST00000444242 1191 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 DPPA3P1-201ENST00000448050 469 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 OR7L1P-201ENST00000456181 380 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AC091917.2-201ENST00000505002 744 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AC107393.1-201ENST00000512403 346 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AC022790.1-201ENST00000522872 204 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 PRELID2P1-201ENST00000552837 301 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.94□□□□□ -2.1
HMGA1P17096 AC092954.1-201ENST00000609121 445 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGA1P17096 AC034102.8-201ENST00000615146 484 ntBASIC1.94□□□□□ -2.1
HMGA1P17096 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGA1P17096 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
HMGA1P17096 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMGA1P17096 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMGA1P17096 MIR1294-201ENST00000408503 142 ntBASIC1.93□□□□□ -2.1
HMGA1P17096 RPL31P2-201ENST00000413849 377 ntBASIC1.93□□□□□ -2.1
HMGA1P17096 PRELID3BP11-201ENST00000414230 479 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms