Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFRAP16234 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFRAP16234 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 OR5H2-201ENST00000355273 945 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDGFRAP16234 MIR30E-201ENST00000362104 92 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 MIR208A-201ENST00000362287 71 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 RNU6-28P-201ENST00000362378 107 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 SNORD46.1-201ENST00000364139 104 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 RNU6-83P-201ENST00000384568 112 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 RNA5SP44-201ENST00000410446 133 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 USP9YP33-201ENST00000412220 421 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 MTCYBP45-201ENST00000435243 565 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 USP9YP35-201ENST00000435696 412 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 Z73417.1-201ENST00000447373 778 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC008264.1-201ENST00000447612 367 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 MRPS31P2-201ENST00000451581 518 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC093278.1-201ENST00000494700 600 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 MTND4LP22-201ENST00000508209 276 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFRAP16234 SNORA31.8-201ENST00000516327 108 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 SNRPGP16-201ENST00000533275 226 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC023050.2-201ENST00000544968 387 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 OR4T1P-201ENST00000554933 911 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC087465.1-201ENST00000560574 245 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AC090615.1-201ENST00000577519 154 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFRAP16234 ELOCP35-201ENST00000604289 336 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AL031176.1-201ENST00000604554 466 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 VIS1.1-201ENST00000610517 203 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 MIR7975-201ENST00000619350 68 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AP000484.1-201ENST00000620067 1252 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 ZNF826P-207ENST00000622273 1910 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AP002782.1-201ENST00000623107 614 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.57□□□□□ -1.84
PDGFRAP16234 CRYM-AS1-204ENST00000637983 556 ntBASIC3.57□□□□□ -1.84
PDGFRAP16234 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFRAP16234 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFRAP16234 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFRAP16234 AC002546.1-201ENST00000588041 2504 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFRAP16234 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PDGFRAP16234 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 SNORA48.8-201ENST00000391324 134 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC126124.2-201ENST00000413542 321 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 HMGB3P23-201ENST00000414981 585 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 HSFY4P-201ENST00000415994 1181 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 BEND7P1-201ENST00000422058 457 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFRAP16234 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFRAP16234 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFRAP16234 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 RPL21P10-201ENST00000463521 490 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFRAP16234 AC091951.3-201ENST00000504093 246 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFRAP16234 FCF1P8-201ENST00000510322 597 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFRAP16234 ARL2BPP6-201ENST00000512757 439 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 RNU6-150P-201ENST00000516237 95 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 RNU5A-4P-201ENST00000516588 111 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.56□□□□□ -1.84
PDGFRAP16234 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFRAP16234 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFRAP16234 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFRAP16234 FAM60BP-201ENST00000578364 658 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFRAP16234 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFRAP16234 MIR4760-201ENST00000585040 80 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC061975.8-201ENST00000587058 721 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 BNIP3P22-201ENST00000593399 556 ntBASIC3.56□□□□□ -1.84
PDGFRAP16234 AC022146.1-201ENST00000595307 847 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms