Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP001486.3-201ENST00000615334 372 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 AL160413.1-201ENST00000622780 310 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 MIR4496-201ENST00000635896 61 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL6A2P12110 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL6A2P12110 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.74□□□□□ -1.65
COL6A2P12110 AC018529.3-201ENST00000624212 2254 ntBASIC4.74□□□□□ -1.65
COL6A2P12110 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 AL133243.3-201ENST00000617415 3004 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
COL6A2P12110 Z73965.1-201ENST00000623412 2297 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL6A2P12110 RN7SKP104-201ENST00000362605 328 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AL121834.1-202ENST00000404494 277 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 RNU2-39P-201ENST00000410604 198 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC114755.2-201ENST00000413520 361 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 AL161631.1-201ENST00000417933 486 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC005534.2-201ENST00000431047 433 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 ERLEC1P1-201ENST00000433806 578 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 RPL36AP6-201ENST00000435770 321 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.73□□□□□ -1.65
COL6A2P12110 RHOT1P3-201ENST00000436571 331 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 RPL35AP22-201ENST00000436855 335 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 RNU6-329P-201ENST00000459618 107 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC053481.1-201ENST00000467217 306 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.73□□□□□ -1.65
COL6A2P12110 ST13P14-201ENST00000474095 734 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 RPL23AP11-201ENST00000475260 469 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC116562.3-201ENST00000506136 177 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC103851.1-201ENST00000506833 274 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC068587.5-201ENST00000528506 175 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AP005435.4-201ENST00000529514 284 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 OR10G5P-201ENST00000532733 358 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 OR1F2P-201ENST00000570470 933 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC007687.1-201ENST00000602704 304 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC093799.2-201ENST00000610062 578 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 AC093913.1-201ENST00000614178 329 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 SNX18P1Y-201ENST00000616231 511 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 uc_338.11-201ENST00000619132 160 ntBASIC4.73□□□□□ -1.65
COL6A2P12110 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.73□□□□□ -1.65
COL6A2P12110 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL6A2P12110 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL6A2P12110 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL6A2P12110 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.72□□□□□ -1.65
COL6A2P12110 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.72□□□□□ -1.65
COL6A2P12110 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 RNA5SP443-201ENST00000363083 132 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 Y_RNA.100-201ENST00000363141 102 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 Y_RNA.431-201ENST00000384086 102 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 RNU6-754P-201ENST00000391166 107 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 RNU6-903P-201ENST00000391270 109 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.72□□□□□ -1.65
COL6A2P12110 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 RNU2-29P-201ENST00000410423 189 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 OR1AA1P-201ENST00000419597 916 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.72□□□□□ -1.65
COL6A2P12110 AL513533.1-201ENST00000453728 415 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AC233279.1-201ENST00000455300 423 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 MRPS17P3-201ENST00000465453 385 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 Y_RNA.691-201ENST00000516611 103 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 BTF3P12-201ENST00000519620 469 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 HMGB1P41-201ENST00000520234 440 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 SUMO2P20-201ENST00000520803 283 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 AL133271.1-201ENST00000538229 291 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.72□□□□□ -1.65
COL6A2P12110 AC044860.2-201ENST00000561005 179 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AC093249.4-201ENST00000564755 259 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 ATP5J2P6-201ENST00000565203 266 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AL355375.2-201ENST00000574825 175 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.72□□□□□ -1.65
COL6A2P12110 MIR4742-201ENST00000581069 85 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AC113139.1-201ENST00000605049 239 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AC006329.2-201ENST00000611491 394 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AC093838.1-201ENST00000613014 469 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AL603758.1-201ENST00000618654 241 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 AP000843.1-201ENST00000624880 701 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms