Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.665-201ENST00000516177 98 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC022790.1-201ENST00000522872 204 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 OR4R1P-201ENST00000529879 463 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 OR4P1P-201ENST00000530808 1136 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC068831.4-201ENST00000556118 109 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL049839.1-201ENST00000556151 657 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC245389.1-201ENST00000605141 529 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL022345.1-201ENST00000607292 135 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL590099.1-201ENST00000615276 138 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL022401.1-201ENST00000619498 108 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 RMST_9.1-201ENST00000619945 193 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC093849.1-201ENST00000563631 2209 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 SAGE2P-201ENST00000420011 2126 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AP005435.3-201ENST00000531260 3198 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.46□□□□□ -1.37
CSB-PGBD3P0DP91 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CSB-PGBD3P0DP91 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.47-201ENST00000362697 108 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.187-201ENST00000363918 113 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-996P-201ENST00000365438 107 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.476-201ENST00000384347 108 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AL121834.1-202ENST00000404494 277 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AL359634.1-202ENST00000404721 284 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-985P-201ENST00000410182 104 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC008065.1-201ENST00000428525 348 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 ERLEC1P1-201ENST00000433806 578 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 TIMM9P1-201ENST00000436122 256 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 FTH1P1-201ENST00000437933 532 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC000111.2-201ENST00000448200 210 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 MRPS31P2-201ENST00000451581 518 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC025164.1-201ENST00000496249 478 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC005798.1-201ENST00000513715 387 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 OR5B10P-201ENST00000532869 642 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC023575.1-201ENST00000580510 358 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 uc_338.12-201ENST00000616344 181 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 AL022311.1-201ENST00000623726 19416 ntBASIC6.46□□□□□ -1.38
CSB-PGBD3P0DP91 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC006484.1-201ENST00000435086 1884 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RNU4-70P-201ENST00000384579 139 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SKP247-201ENST00000411094 308 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RPS12P24-201ENST00000412619 387 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC093156.1-201ENST00000440382 670 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 Z95327.1-201ENST00000446082 482 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC079781.2-201ENST00000446424 169 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC073415.1-201ENST00000449240 153 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 U8.20-201ENST00000459445 131 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 MTCO1P29-201ENST00000496868 288 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AL139099.1-201ENST00000497398 403 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC026801.2-201ENST00000515352 425 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-27P-201ENST00000516146 107 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SKP21-201ENST00000516503 220 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-410P-201ENST00000517006 107 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 OR4T1P-201ENST00000554933 911 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 AC098848.2-201ENST00000588023 330 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 CYP2C61P-201ENST00000604072 290 ntBASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms