Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ELOCP14-201ENST00000428070 331 ntBASIC4.3□□□□□ -1.72
RHOP08100 MTCO2P11-201ENST00000431069 680 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 ELOCP7-201ENST00000439968 331 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 snoU13.7-201ENST00000459220 104 ntBASIC4.3□□□□□ -1.72
RHOP08100 RPL23AP2-201ENST00000471227 466 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 AC069439.1-201ENST00000494739 167 ntBASIC4.3□□□□□ -1.72
RHOP08100 HMGB1P21-201ENST00000502313 581 ntBASIC4.3□□□□□ -1.72
RHOP08100 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.3□□□□□ -1.72
RHOP08100 AC114781.4-201ENST00000513707 639 ntBASIC4.3□□□□□ -1.72
RHOP08100 SNORA20.3-201ENST00000516880 132 ntBASIC4.3□□□□□ -1.72
RHOP08100 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.3□□□□□ -1.72
RHOP08100 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AL845331.3-202ENST00000562856 261 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.3□□□□□ -1.72
RHOP08100 AC009101.1-201ENST00000568135 242 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 AC009159.1-201ENST00000618386 642 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC009318.4-201ENST00000620496 486 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC104985.2-201ENST00000620598 500 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC004009.2-201ENST00000623016 728 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC005086.4-201ENST00000623065 213 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC000123.2-201ENST00000623124 461 ntBASIC4.3□□□□□ -1.72
RHOP08100 AP006248.2-201ENST00000623309 592 ntBASIC4.3□□□□□ -1.72
RHOP08100 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 MIR1321-201ENST00000637766 79 ntBASIC4.3□□□□□ -1.72
RHOP08100 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.3□□□□□ -1.72
RHOP08100 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RHOP08100 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 AC074029.4-201ENST00000624796 1859 ntBASIC4.29□□□□□ -1.72
RHOP08100 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 FRG1BP-201ENST00000278882 761 ntBASIC4.29□□□□□ -1.72
RHOP08100 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RHOP08100 AL161781.1-201ENST00000354277 403 ntBASIC4.29□□□□□ -1.72
RHOP08100 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 RNU6-797P-201ENST00000363101 109 ntBASIC4.29□□□□□ -1.72
RHOP08100 RNU6-534P-201ENST00000364877 106 ntBASIC4.29□□□□□ -1.72
RHOP08100 RNA5SP22-201ENST00000365393 109 ntBASIC4.29□□□□□ -1.72
RHOP08100 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 SNORD96B-201ENST00000386148 79 ntBASIC4.29□□□□□ -1.72
RHOP08100 SSXP10-201ENST00000402595 565 ntBASIC4.29□□□□□ -1.72
RHOP08100 HMGB3P20-201ENST00000417997 600 ntBASIC4.29□□□□□ -1.72
RHOP08100 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.29□□□□□ -1.72
RHOP08100 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.29□□□□□ -1.72
RHOP08100 AC018644.1-201ENST00000429934 551 ntBASIC4.29□□□□□ -1.72
RHOP08100 AC002486.1-201ENST00000435098 391 ntBASIC4.29□□□□□ -1.72
RHOP08100 AL358232.1-201ENST00000448030 501 ntBASIC4.29□□□□□ -1.72
RHOP08100 DPPA3P1-201ENST00000448050 469 ntBASIC4.29□□□□□ -1.72
RHOP08100 AC132479.1-201ENST00000449160 144 ntBASIC4.29□□□□□ -1.72
RHOP08100 AC005297.2-201ENST00000450430 606 ntBASIC4.29□□□□□ -1.72
RHOP08100 ABCF2P2-201ENST00000450549 296 ntBASIC4.29□□□□□ -1.72
RHOP08100 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.29□□□□□ -1.72
RHOP08100 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.29□□□□□ -1.72
RHOP08100 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.29□□□□□ -1.72
RHOP08100 AC105914.1-201ENST00000511798 226 ntBASIC4.29□□□□□ -1.72
RHOP08100 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 Y_RNA.693-201ENST00000516641 110 ntBASIC4.29□□□□□ -1.72
RHOP08100 AP003181.2-201ENST00000528941 181 ntBASIC4.29□□□□□ -1.72
RHOP08100 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 AL161713.1-201ENST00000555538 145 ntBASIC4.29□□□□□ -1.72
RHOP08100 MIR4458-201ENST00000578872 75 ntBASIC4.29□□□□□ -1.72
RHOP08100 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.29□□□□□ -1.72
RHOP08100 MIR5684-201ENST00000585074 65 ntBASIC4.29□□□□□ -1.72
RHOP08100 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHOP08100 AC005255.1-201ENST00000593748 216 ntBASIC4.29□□□□□ -1.72
RHOP08100 AL391646.1-201ENST00000603860 190 ntBASIC4.29□□□□□ -1.72
RHOP08100 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.29□□□□□ -1.72
RHOP08100 BX664608.1-201ENST00000610519 487 ntBASIC4.29□□□□□ -1.72
RHOP08100 MIR6075-201ENST00000620782 95 ntBASIC4.29□□□□□ -1.72
RHOP08100 AL732618.1-201ENST00000623251 301 ntBASIC4.29□□□□□ -1.72
RHOP08100 AP003122.6-201ENST00000623831 495 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms