Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL049780.3-201ENST00000624612 1583 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC004925.1-201ENST00000624256 2706 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 MIR22-201ENST00000362190 85 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 U8.9-201ENST00000365667 134 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RNU6-224P-201ENST00000384055 107 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RNU2-71P-201ENST00000411395 189 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AL161449.1-201ENST00000414531 1199 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RPL7P44-201ENST00000424827 742 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC006946.1-201ENST00000429106 328 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 SAR1AP4-201ENST00000429225 591 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AL671855.1-201ENST00000446875 1203 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RN7SL297P-201ENST00000483161 293 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC008885.1-201ENST00000514930 301 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RNU6-1261P-201ENST00000517194 104 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 RN7SKP57-201ENST00000517248 293 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC009812.2-201ENST00000517657 457 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AP001189.2-201ENST00000527320 189 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 EEF1B2P4-201ENST00000551398 348 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 GTF2IP8-201ENST00000560687 584 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC012493.2-201ENST00000595083 291 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC084824.4-201ENST00000620106 731 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AL353748.2-201ENST00000622148 471 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AL049777.1-201ENST00000622740 518 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC009039.2-201ENST00000624524 529 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 AC004808.1-201ENST00000627671 721 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 CYP3A51P-201ENST00000633513 256 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DPB1P04440 GDI2P1-201ENST00000429312 1336 ntBASIC2.6□□□□□ -1.99
HLA-DPB1P04440 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 GABRG2-229ENST00000641017 3628 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 RNU5D-1-201ENST00000363299 116 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 snoZ40.1-201ENST00000364540 72 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 Y_RNA.333-201ENST00000365274 102 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 DEFB109C-201ENST00000382575 264 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 DEFB109B-201ENST00000382656 264 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 RNU2-42P-201ENST00000410697 113 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 OR4K6P-201ENST00000416478 897 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 YPEL5P1-201ENST00000419731 367 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 MTND2P19-201ENST00000449129 1012 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 snoU13.4-201ENST00000458916 104 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 MTCO3P35-201ENST00000485582 781 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC010460.2-201ENST00000509054 677 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 RNU6-276P-201ENST00000516114 96 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC010198.2-201ENST00000550612 259 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC012182.1-201ENST00000570133 895 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 MIR5195-201ENST00000583555 115 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC096947.1-201ENST00000603233 470 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC005014.3-201ENST00000605985 190 ntBASIC2.59□□□□□ -1.99
HLA-DPB1P04440 AC018645.2-201ENST00000609151 472 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms