Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC017037.2-201ENST00000513850 890 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AC104027.1-201ENST00000521887 300 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 OR5G4P-201ENST00000525251 760 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AC111188.2-201ENST00000529697 1387 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC024153.1-201ENST00000603103 365 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 RNU6-84P-201ENST00000607737 102 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
COL2A1P02458 AC139769.3-201ENST00000618383 175 ntBASIC3.53□□□□□ -1.84
COL2A1P02458 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.53□□□□□ -1.84
COL2A1P02458 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL2A1P02458 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
COL2A1P02458 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL2A1P02458 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
COL2A1P02458 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
COL2A1P02458 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
COL2A1P02458 MTND5P11-201ENST00000511037 1812 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
COL2A1P02458 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL2A1P02458 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL2A1P02458 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.52□□□□□ -1.85
COL2A1P02458 RNY3P14-201ENST00000384309 102 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 MT-TH-201ENST00000387441 69 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 MRPS10P2-201ENST00000431226 381 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.52□□□□□ -1.85
COL2A1P02458 RPS24P1-201ENST00000438550 371 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AL354941.1-201ENST00000438600 464 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 RPS24P13-201ENST00000442520 397 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.52□□□□□ -1.85
COL2A1P02458 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.52□□□□□ -1.85
COL2A1P02458 RNU7-157P-201ENST00000459600 66 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AC092045.1-201ENST00000495716 1231 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL2A1P02458 RN7SKP132-201ENST00000516001 208 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 RNU6-720P-201ENST00000516363 108 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 Y_RNA.695-201ENST00000516715 107 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.52□□□□□ -1.85
COL2A1P02458 AC245505.1-201ENST00000556398 224 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AC027104.1-201ENST00000563702 681 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 ROCK1P1-201ENST00000573767 549 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 MIR4524B-201ENST00000581569 115 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL2A1P02458 AP003465.2-201ENST00000602571 373 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AL591516.1-201ENST00000611326 274 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 AL359314.1-201ENST00000616913 261 ntBASIC3.52□□□□□ -1.85
COL2A1P02458 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL2A1P02458 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
COL2A1P02458 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL2A1P02458 CDC27P2-201ENST00000425026 1922 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 U3.4-201ENST00000363352 213 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RNU6-304P-201ENST00000364855 107 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 SNORA26.8-201ENST00000391306 124 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 DEFB108C-201ENST00000400154 252 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 ERHP2-201ENST00000402323 299 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RNU6-757P-201ENST00000410334 100 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RN7SKP222-201ENST00000410651 315 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 FCF1P9-201ENST00000412546 282 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AMD1P2-201ENST00000412936 992 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC023128.2-201ENST00000420880 1223 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC104651.1-201ENST00000427559 735 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 AL596276.1-201ENST00000434465 418 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC112653.1-201ENST00000443851 386 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RPL37P4-201ENST00000448908 268 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC108938.1-201ENST00000451204 136 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RPL23AP44-201ENST00000482216 473 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 NCOR1P1-202ENST00000486162 291 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC104685.1-201ENST00000502445 371 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 HSPE1P23-201ENST00000509838 286 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 RNU6-319P-201ENST00000516025 108 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 RNA5SP367-201ENST00000516557 118 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL2A1P02458 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC011611.5-201ENST00000552477 578 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 MTND4LP24-201ENST00000572277 291 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.51□□□□□ -1.85
COL2A1P02458 AC011260.1-201ENST00000578420 472 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC008507.1-201ENST00000587506 734 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms