Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC104237.2-201ENST00000612456 443 ntBASIC2.13□□□□□ -2.07
TNFP01375 AC007275.1-201ENST00000621243 671 ntBASIC2.13□□□□□ -2.07
TNFP01375 FO624990.1-201ENST00000636373 85 ntBASIC2.13□□□□□ -2.07
TNFP01375 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TNFP01375 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFP01375 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
TNFP01375 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
TNFP01375 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TNFP01375 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TNFP01375 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
TNFP01375 RNA5SP391-201ENST00000363456 119 ntBASIC2.12□□□□□ -2.07
TNFP01375 RNU6-799P-201ENST00000363567 107 ntBASIC2.12□□□□□ -2.07
TNFP01375 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
TNFP01375 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
TNFP01375 AC233981.1-201ENST00000423224 461 ntBASIC2.12□□□□□ -2.07
TNFP01375 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.12□□□□□ -2.07
TNFP01375 RPS26P56-201ENST00000444468 240 ntBASIC2.12□□□□□ -2.07
TNFP01375 MTCO3P11-201ENST00000455103 774 ntBASIC2.12□□□□□ -2.07
TNFP01375 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.12□□□□□ -2.07
TNFP01375 AC073901.1-201ENST00000462471 408 ntBASIC2.12□□□□□ -2.07
TNFP01375 AC087879.1-201ENST00000474343 374 ntBASIC2.12□□□□□ -2.07
TNFP01375 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFP01375 RPL37P25-201ENST00000507308 276 ntBASIC2.12□□□□□ -2.07
TNFP01375 AC008716.1-201ENST00000511084 513 ntBASIC2.12□□□□□ -2.07
TNFP01375 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.12□□□□□ -2.07
TNFP01375 RPPH1-2P-201ENST00000516688 293 ntBASIC2.12□□□□□ -2.07
TNFP01375 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TNFP01375 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFP01375 AC115085.1-201ENST00000588924 229 ntBASIC2.12□□□□□ -2.07
TNFP01375 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFP01375 TPMTP1-201ENST00000592307 737 ntBASIC2.12□□□□□ -2.07
TNFP01375 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
TNFP01375 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TNFP01375 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFP01375 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TNFP01375 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.11□□□□□ -2.07
TNFP01375 AC005517.2-201ENST00000424673 553 ntBASIC2.11□□□□□ -2.07
TNFP01375 SUMO1P4-201ENST00000429430 302 ntBASIC2.11□□□□□ -2.07
TNFP01375 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.11□□□□□ -2.07
TNFP01375 FDX1P2-201ENST00000450769 375 ntBASIC2.11□□□□□ -2.07
TNFP01375 RPL23AP23-201ENST00000452590 471 ntBASIC2.11□□□□□ -2.07
TNFP01375 HMGB1P15-201ENST00000453854 435 ntBASIC2.11□□□□□ -2.07
TNFP01375 RPS23P3-201ENST00000470993 430 ntBASIC2.11□□□□□ -2.07
TNFP01375 RNA5SP402-201ENST00000517148 110 ntBASIC2.11□□□□□ -2.07
TNFP01375 IGKV2-36-201ENST00000519999 223 ntBASIC2.11□□□□□ -2.07
TNFP01375 EEF1A1P37-201ENST00000522748 715 ntBASIC2.11□□□□□ -2.07
TNFP01375 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
TNFP01375 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFP01375 LRRC37A5P-203ENST00000580181 585 ntBASIC2.11□□□□□ -2.07
TNFP01375 AP001029.3-201ENST00000588063 596 ntBASIC2.11□□□□□ -2.07
TNFP01375 AC020895.1-201ENST00000595362 272 ntBASIC2.11□□□□□ -2.07
TNFP01375 AL161734.1-201ENST00000609720 557 ntBASIC2.11□□□□□ -2.07
TNFP01375 MIR7843-201ENST00000622274 79 ntBASIC2.11□□□□□ -2.07
TNFP01375 AC103798.2-201ENST00000624292 632 ntBASIC2.11□□□□□ -2.07
TNFP01375 AC092159.4-201ENST00000624944 550 ntBASIC2.11□□□□□ -2.07
TNFP01375 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFP01375 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFP01375 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TNFP01375 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TNFP01375 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
TNFP01375 AL512283.1-201ENST00000606756 1384 ntBASIC2.1□□□□□ -2.07
TNFP01375 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
TNFP01375 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
TNFP01375 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TNFP01375 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TNFP01375 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
TNFP01375 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.1□□□□□ -2.07
TNFP01375 AL513477.1-202ENST00000417061 214 ntBASIC2.1□□□□□ -2.07
TNFP01375 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.1□□□□□ -2.07
TNFP01375 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.1□□□□□ -2.07
TNFP01375 OR51AB1P-201ENST00000429046 620 ntBASIC2.1□□□□□ -2.07
TNFP01375 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.1□□□□□ -2.07
TNFP01375 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TNFP01375 AC009237.8-201ENST00000445492 379 ntBASIC2.1□□□□□ -2.07
TNFP01375 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.1□□□□□ -2.07
TNFP01375 AC010625.1-201ENST00000511296 403 ntBASIC2.1□□□□□ -2.07
TNFP01375 AC008837.1-201ENST00000511513 412 ntBASIC2.1□□□□□ -2.07
TNFP01375 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
TNFP01375 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.1□□□□□ -2.07
TNFP01375 AC022690.1-201ENST00000526681 550 ntBASIC2.1□□□□□ -2.07
TNFP01375 NBEAP1-201ENST00000554452 979 ntBASIC2.1□□□□□ -2.07
TNFP01375 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
TNFP01375 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.1□□□□□ -2.07
TNFP01375 AC055764.2-201ENST00000610089 670 ntBASIC2.1□□□□□ -2.07
TNFP01375 NF1P10-201ENST00000613227 742 ntBASIC2.1□□□□□ -2.07
TNFP01375 AC010378.1-201ENST00000619270 362 ntBASIC2.1□□□□□ -2.07
TNFP01375 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
TNFP01375 AL359757.2-201ENST00000624309 274 ntBASIC2.1□□□□□ -2.07
TNFP01375 AL160394.1-201ENST00000624765 724 ntBASIC2.1□□□□□ -2.07
TNFP01375 AC091564.4-201ENST00000533934 2194 ntBASIC2.1□□□□□ -2.07
TNFP01375 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
TNFP01375 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.09□□□□□ -2.07
TNFP01375 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
TNFP01375 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TNFP01375 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TNFP01375 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TNFP01375 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
TNFP01375 AL079342.1-201ENST00000401460 267 ntBASIC2.09□□□□□ -2.07
TNFP01375 RNU2-25P-201ENST00000411041 191 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC005005.2-201ENST00000420779 380 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms