Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 snoU13.7-201ENST00000459220 104 ntBASIC1.69□□□□□ -2.14
SIX6O95475 AC015908.1-201ENST00000478739 476 ntBASIC1.69□□□□□ -2.14
SIX6O95475 RN7SL636P-201ENST00000497504 294 ntBASIC1.69□□□□□ -2.14
SIX6O95475 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.69□□□□□ -2.14
SIX6O95475 AC004062.1-201ENST00000509926 645 ntBASIC1.69□□□□□ -2.14
SIX6O95475 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.69□□□□□ -2.14
SIX6O95475 RN7SKP31-201ENST00000516354 278 ntBASIC1.69□□□□□ -2.14
SIX6O95475 RNA5SP200-201ENST00000516360 103 ntBASIC1.69□□□□□ -2.14
SIX6O95475 RNA5SP148-201ENST00000516527 94 ntBASIC1.69□□□□□ -2.14
SIX6O95475 RNU6-1308P-201ENST00000516817 103 ntBASIC1.69□□□□□ -2.14
SIX6O95475 RPL7P20-201ENST00000520308 745 ntBASIC1.69□□□□□ -2.14
SIX6O95475 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.69□□□□□ -2.14
SIX6O95475 AC113192.3-201ENST00000529152 742 ntBASIC1.69□□□□□ -2.14
SIX6O95475 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.69□□□□□ -2.14
SIX6O95475 AC027176.1-201ENST00000560204 514 ntBASIC1.69□□□□□ -2.14
SIX6O95475 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.69□□□□□ -2.14
SIX6O95475 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
SIX6O95475 MIR4325-201ENST00000583049 90 ntBASIC1.69□□□□□ -2.14
SIX6O95475 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.69□□□□□ -2.14
SIX6O95475 U73023.1-201ENST00000603134 700 ntBASIC1.69□□□□□ -2.14
SIX6O95475 AC018755.4-201ENST00000619715 454 ntBASIC1.69□□□□□ -2.14
SIX6O95475 MIR6132-201ENST00000622083 109 ntBASIC1.69□□□□□ -2.14
SIX6O95475 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SIX6O95475 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SIX6O95475 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.69□□□□□ -2.14
SIX6O95475 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
SIX6O95475 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SIX6O95475 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 Y_RNA.126-201ENST00000363382 111 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AL445529.1-201ENST00000398713 389 ntBASIC1.68□□□□□ -2.14
SIX6O95475 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 RPL7P37-201ENST00000425095 738 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX6O95475 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.68□□□□□ -2.14
SIX6O95475 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 RNA5SP310-201ENST00000459084 116 ntBASIC1.68□□□□□ -2.14
SIX6O95475 S100A11P2-201ENST00000467589 312 ntBASIC1.68□□□□□ -2.14
SIX6O95475 RPS29P20-201ENST00000489592 171 ntBASIC1.68□□□□□ -2.14
SIX6O95475 MTCO2P9-201ENST00000503214 694 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 AC113155.1-201ENST00000511141 769 ntBASIC1.68□□□□□ -2.14
SIX6O95475 IGKV2-36-201ENST00000519999 223 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 GLUD1P4-201ENST00000590914 418 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC092474.3-201ENST00000603022 568 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC024220.1-201ENST00000603675 484 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC245100.7-201ENST00000609678 442 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC104307.1-201ENST00000616142 196 ntBASIC1.68□□□□□ -2.14
SIX6O95475 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.68□□□□□ -2.14
SIX6O95475 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX6O95475 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX6O95475 ZNF658B-202ENST00000615961 3375 ntBASIC1.68□□□□□ -2.14
SIX6O95475 AC011460.1-201ENST00000636268 1834 ntBASIC1.68□□□□□ -2.14
SIX6O95475 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX6O95475 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SIX6O95475 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX6O95475 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.67□□□□□ -2.14
SIX6O95475 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 MIR196B-201ENST00000384852 84 ntBASIC1.67□□□□□ -2.14
SIX6O95475 SNORA46.1-201ENST00000391069 153 ntBASIC1.67□□□□□ -2.14
SIX6O95475 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.67□□□□□ -2.14
SIX6O95475 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.67□□□□□ -2.14
SIX6O95475 ZNF90P2-204ENST00000419323 1075 ntBASIC1.67□□□□□ -2.14
SIX6O95475 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.67□□□□□ -2.14
SIX6O95475 GPM6BP3-201ENST00000442797 145 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AL136380.1-201ENST00000447970 162 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.67□□□□□ -2.14
SIX6O95475 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.67□□□□□ -2.14
SIX6O95475 PPP1R2P5-201ENST00000457256 603 ntBASIC1.67□□□□□ -2.14
SIX6O95475 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.67□□□□□ -2.14
SIX6O95475 FAM133DP-201ENST00000464802 691 ntBASIC1.67□□□□□ -2.14
SIX6O95475 RPL30P14-201ENST00000482744 348 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.67□□□□□ -2.14
SIX6O95475 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.67□□□□□ -2.14
SIX6O95475 SETP12-201ENST00000514068 805 ntBASIC1.67□□□□□ -2.14
SIX6O95475 RNA5SP281-201ENST00000516504 135 ntBASIC1.67□□□□□ -2.14
SIX6O95475 SCARNA16.3-201ENST00000516595 184 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.67□□□□□ -2.14
SIX6O95475 AC083923.1-201ENST00000523708 376 ntBASIC1.67□□□□□ -2.14
SIX6O95475 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.67□□□□□ -2.14
SIX6O95475 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.67□□□□□ -2.14
SIX6O95475 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.67□□□□□ -2.14
SIX6O95475 MIR548Y-201ENST00000582739 110 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AC008739.2-201ENST00000597006 317 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AL020997.2-201ENST00000602607 184 ntBASIC1.67□□□□□ -2.14
SIX6O95475 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
SIX6O95475 AP004372.1-201ENST00000604842 844 ntBASIC1.67□□□□□ -2.14
SIX6O95475 MIR6817-201ENST00000615588 66 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms