Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 TXNP6-201ENST00000510190 310 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 PPBPP1-201ENST00000510807 373 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 MTND6P33-201ENST00000571794 183 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.34□□□□□ -1.55
VAMP4O75379 MIR3167-201ENST00000579623 85 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 MIR3118-1-201ENST00000581787 76 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.34□□□□□ -1.55
VAMP4O75379 AC121334.2-201ENST00000605387 271 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AL031666.3-201ENST00000609320 1006 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 AC009233.1-201ENST00000616477 371 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.34□□□□□ -1.55
VAMP4O75379 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAMP4O75379 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAMP4O75379 AC000123.3-201ENST00000624029 4975 ntBASIC5.34□□□□□ -1.55
VAMP4O75379 NUP58P1-201ENST00000502546 1738 ntBASIC5.34□□□□□ -1.56
VAMP4O75379 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
VAMP4O75379 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.34□□□□□ -1.56
VAMP4O75379 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.34□□□□□ -1.56
VAMP4O75379 AC097714.1-201ENST00000511272 1647 ntBASIC5.34□□□□□ -1.56
VAMP4O75379 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 AC006971.1-201ENST00000407916 4486 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 RNU4-1-201ENST00000363925 141 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 RNU6-116P-201ENST00000384042 109 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAMP4O75379 AL356095.1-201ENST00000417217 199 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 MTATP6P18-201ENST00000417994 673 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP4O75379 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 AL031736.2-201ENST00000426573 787 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 AL162388.1-201ENST00000450912 352 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP4O75379 RPL5P30-201ENST00000465511 891 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC083798.1-201ENST00000472671 131 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC087879.1-201ENST00000474343 374 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 RPL39P36-201ENST00000490784 156 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC104057.1-201ENST00000515547 497 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC123904.2-201ENST00000548059 300 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 PARP1P2-201ENST00000556806 195 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 ANP32BP3-201ENST00000559213 706 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC010680.3-201ENST00000604215 520 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AL591034.3-201ENST00000605511 685 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC055876.5-201ENST00000605667 259 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 AC006504.8-201ENST00000621046 635 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.33□□□□□ -1.56
VAMP4O75379 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
VAMP4O75379 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 AC116667.1-201ENST00000604855 2072 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 MTND5P28-201ENST00000438005 1594 ntBASIC5.33□□□□□ -1.56
VAMP4O75379 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VAMP4O75379 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP4O75379 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP4O75379 AC130650.2-201ENST00000618736 2403 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 CKAP2P1-201ENST00000555477 2049 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 RNU5E-1-201ENST00000362477 120 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 Y_RNA.72-201ENST00000362894 103 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 RNU6-853P-201ENST00000364306 107 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 SNORA70C-201ENST00000384538 135 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VAMP4O75379 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.32□□□□□ -1.56
VAMP4O75379 AL358472.1-201ENST00000431295 329 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 USP9YP15-201ENST00000442391 422 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP4O75379 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP4O75379 FDX1P2-201ENST00000450769 375 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP4O75379 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP4O75379 RPS20P32-201ENST00000456044 356 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 AC002456.2-201ENST00000509356 380 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP4O75379 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP4O75379 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP4O75379 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.32□□□□□ -1.56
VAMP4O75379 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.32□□□□□ -1.56
VAMP4O75379 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 MIR6867-201ENST00000610636 67 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 AC009161.2-201ENST00000624626 138 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 RNA5SP196-201ENST00000625967 102 ntBASIC5.32□□□□□ -1.56
VAMP4O75379 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAMP4O75379 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.32□□□□□ -1.56
VAMP4O75379 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms