Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
LDB3O75112 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB3O75112 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
LDB3O75112 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LDB3O75112 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 RNU6-780P-201ENST00000391030 104 ntBASIC3.68□□□□□ -1.82
LDB3O75112 RNU6-952P-201ENST00000391164 108 ntBASIC3.68□□□□□ -1.82
LDB3O75112 MIR1193-201ENST00000408109 78 ntBASIC3.68□□□□□ -1.82
LDB3O75112 MIR320C1-201ENST00000408566 88 ntBASIC3.68□□□□□ -1.82
LDB3O75112 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.68□□□□□ -1.82
LDB3O75112 HMGB3P23-201ENST00000414981 585 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 AL389915.1-201ENST00000422463 466 ntBASIC3.68□□□□□ -1.82
LDB3O75112 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 HMGB1P31-201ENST00000437242 427 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 SNRPEP8-201ENST00000442866 260 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 MTCO1P27-201ENST00000448269 226 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.68□□□□□ -1.82
LDB3O75112 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
LDB3O75112 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AC105252.1-201ENST00000503089 286 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AC093767.1-201ENST00000504523 156 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC021678.1-201ENST00000505195 936 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AC091133.4-201ENST00000511142 308 ntBASIC3.68□□□□□ -1.82
LDB3O75112 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB3O75112 AC026726.1-201ENST00000512859 601 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 AC087369.1-201ENST00000520775 996 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC022861.1-201ENST00000522981 663 ntBASIC3.68□□□□□ -1.82
LDB3O75112 CBX3P7-201ENST00000532876 502 ntBASIC3.68□□□□□ -1.82
LDB3O75112 OR6C73P-201ENST00000546432 358 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.68□□□□□ -1.82
LDB3O75112 MIR5697-201ENST00000578045 78 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC112187.2-201ENST00000604345 283 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC091965.4-201ENST00000607691 587 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 TUG1_1.1-201ENST00000610654 145 ntBASIC3.68□□□□□ -1.82
LDB3O75112 MIR6798-201ENST00000612887 67 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 AC009318.4-201ENST00000620496 486 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC138649.3-201ENST00000622154 254 ntBASIC3.68□□□□□ -1.82
LDB3O75112 CRYM-AS1-204ENST00000637983 556 ntBASIC3.68□□□□□ -1.82
LDB3O75112 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB3O75112 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB3O75112 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB3O75112 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 AC018555.1-201ENST00000567548 1980 ntBASIC3.67□□□□□ -1.82
LDB3O75112 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB3O75112 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 ZNF734P-201ENST00000419494 1534 ntBASIC3.67□□□□□ -1.82
LDB3O75112 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB3O75112 Y_RNA.70-201ENST00000362886 110 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RNU4-12P-201ENST00000365233 139 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RNU5E-5P-201ENST00000365379 116 ntBASIC3.67□□□□□ -1.82
LDB3O75112 Y_RNA.372-201ENST00000365599 102 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RPS3AP36-201ENST00000398190 775 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC025750.1-201ENST00000399891 379 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AL031679.1-201ENST00000400616 525 ntBASIC3.67□□□□□ -1.82
LDB3O75112 MIR1277-201ENST00000408536 78 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 AIMP1P1-201ENST00000418670 937 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RPS27AP14-201ENST00000422868 454 ntBASIC3.67□□□□□ -1.82
LDB3O75112 ISCA1P1-201ENST00000426679 387 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 AC087650.1-201ENST00000431445 468 ntBASIC3.67□□□□□ -1.82
LDB3O75112 KCTD9P3-201ENST00000434597 1169 ntBASIC3.67□□□□□ -1.82
LDB3O75112 MTND5P14-201ENST00000441481 1267 ntBASIC3.67□□□□□ -1.82
LDB3O75112 NFU1P2-201ENST00000448700 469 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms