Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.72□□□□□ -1.65
NOBOXO60393 AC022634.1-201ENST00000520765 532 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.72□□□□□ -1.65
NOBOXO60393 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.72□□□□□ -1.65
NOBOXO60393 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.72□□□□□ -1.65
NOBOXO60393 AL117187.1-201ENST00000555482 181 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 AL049839.1-201ENST00000556151 657 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 AC022726.1-201ENST00000587475 207 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 AC008687.2-201ENST00000597865 520 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 APOOP1-201ENST00000604695 592 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.72□□□□□ -1.65
NOBOXO60393 uc_338.22-201ENST00000622722 187 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 CR381572.1-201ENST00000625098 102 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.72□□□□□ -1.65
NOBOXO60393 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 KPNA2P2-201ENST00000419546 1489 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 MTND5P33-201ENST00000571250 1450 ntBASIC4.72□□□□□ -1.65
NOBOXO60393 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
NOBOXO60393 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
NOBOXO60393 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOBOXO60393 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOBOXO60393 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOBOXO60393 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.65
NOBOXO60393 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOBOXO60393 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 AC091046.3-201ENST00000631455 1574 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 AP004289.2-201ENST00000444413 1457 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NOBOXO60393 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 AL590240.1-201ENST00000334118 313 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.66
NOBOXO60393 RNU6-343P-201ENST00000364709 104 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNY4P16-201ENST00000364768 94 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 Y_RNA.301-201ENST00000364990 103 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 AL031679.1-201ENST00000400616 525 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 MTCYBP4-201ENST00000401524 249 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 PRELID3BP11-201ENST00000414230 479 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RPS15AP12-201ENST00000419498 388 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.71□□□□□ -1.66
NOBOXO60393 AC005517.2-201ENST00000424673 553 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 MTCYBP9-201ENST00000431021 303 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RPS26P40-201ENST00000435209 294 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.71□□□□□ -1.66
NOBOXO60393 RPL32P28-201ENST00000443577 397 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AL035551.1-201ENST00000446931 348 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 GMFBP1-201ENST00000467831 427 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 NIP7P2-201ENST00000485801 544 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC090453.1-201ENST00000495560 436 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 PTP4A1P4-201ENST00000512479 322 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC093303.1-201ENST00000514549 295 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNU6-488P-201ENST00000515918 99 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNU4-29P-201ENST00000515943 174 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNU6-410P-201ENST00000517006 107 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNU6-1137P-201ENST00000517073 99 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 RNU6-988P-201ENST00000519081 107 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 COPS8P3-201ENST00000526024 482 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AP003122.3-201ENST00000526316 255 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.71□□□□□ -1.66
NOBOXO60393 TOMM20P2-201ENST00000540082 421 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.71□□□□□ -1.66
NOBOXO60393 AL356432.3-201ENST00000568952 465 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 LARP7P2-201ENST00000575306 125 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 CYP2C61P-201ENST00000604072 290 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC004908.2-201ENST00000609090 574 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 AC131238.1-201ENST00000617135 328 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.71□□□□□ -1.66
NOBOXO60393 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NOBOXO60393 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 LINC01355-201ENST00000566551 5444 ntBASIC4.71□□□□□ -1.66
NOBOXO60393 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.71□□□□□ -1.66
NOBOXO60393 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
NOBOXO60393 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NOBOXO60393 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NOBOXO60393 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOBOXO60393 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
NOBOXO60393 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.7□□□□□ -1.66
NOBOXO60393 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NOBOXO60393 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NOBOXO60393 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOBOXO60393 MAPK10-349ENST00000641767 3661 ntBASIC4.7□□□□□ -1.66
NOBOXO60393 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NOBOXO60393 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
NOBOXO60393 Y_RNA.187-201ENST00000363918 113 ntBASIC4.7□□□□□ -1.66
NOBOXO60393 Y_RNA.193-201ENST00000363979 102 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms