Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.87□□□□□ -2.11
URB1O60287 AC007687.1-201ENST00000602704 304 ntBASIC1.87□□□□□ -2.11
URB1O60287 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.87□□□□□ -2.11
URB1O60287 MIR3670-4-201ENST00000612260 65 ntBASIC1.87□□□□□ -2.11
URB1O60287 AC093591.3-201ENST00000634516 308 ntBASIC1.87□□□□□ -2.11
URB1O60287 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
URB1O60287 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
URB1O60287 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.86□□□□□ -2.11
URB1O60287 RPS27P5-201ENST00000444247 244 ntBASIC1.86□□□□□ -2.11
URB1O60287 AC104564.1-201ENST00000493028 407 ntBASIC1.86□□□□□ -2.11
URB1O60287 TMEM248P1-201ENST00000510579 951 ntBASIC1.86□□□□□ -2.11
URB1O60287 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.86□□□□□ -2.11
URB1O60287 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.86□□□□□ -2.11
URB1O60287 AL645944.1-201ENST00000603857 493 ntBASIC1.86□□□□□ -2.11
URB1O60287 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.86□□□□□ -2.11
URB1O60287 AC010297.1-201ENST00000623948 149 ntBASIC1.86□□□□□ -2.11
URB1O60287 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.86□□□□□ -2.11
URB1O60287 MAPK10-266ENST00000641066 6555 ntBASIC1.86□□□□□ -2.11
URB1O60287 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
URB1O60287 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
URB1O60287 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
URB1O60287 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
URB1O60287 RNA5SP295-201ENST00000362655 121 ntBASIC1.86□□□□□ -2.11
URB1O60287 HSPE1P26-201ENST00000405341 275 ntBASIC1.86□□□□□ -2.11
URB1O60287 AL590084.1-201ENST00000407885 387 ntBASIC1.86□□□□□ -2.11
URB1O60287 AL513331.1-201ENST00000411908 397 ntBASIC1.86□□□□□ -2.11
URB1O60287 RPS15AP12-201ENST00000419498 388 ntBASIC1.86□□□□□ -2.11
URB1O60287 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.86□□□□□ -2.11
URB1O60287 AC027124.2-201ENST00000428249 105 ntBASIC1.86□□□□□ -2.11
URB1O60287 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.86□□□□□ -2.11
URB1O60287 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.86□□□□□ -2.11
URB1O60287 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.86□□□□□ -2.11
URB1O60287 MIR6895-201ENST00000613497 78 ntBASIC1.86□□□□□ -2.11
URB1O60287 AC092650.2-201ENST00000619984 902 ntBASIC1.86□□□□□ -2.11
URB1O60287 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
URB1O60287 MTND5P7-201ENST00000413558 1798 ntBASIC1.85□□□□□ -2.11
URB1O60287 CR382285.2-201ENST00000624662 1495 ntBASIC1.85□□□□□ -2.11
URB1O60287 MIR6073-201ENST00000352083 89 ntBASIC1.85□□□□□ -2.11
URB1O60287 MIR613-201ENST00000385248 95 ntBASIC1.85□□□□□ -2.11
URB1O60287 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
URB1O60287 AL445669.2-201ENST00000454425 421 ntBASIC1.85□□□□□ -2.11
URB1O60287 HMGB3P15-201ENST00000507326 574 ntBASIC1.85□□□□□ -2.11
URB1O60287 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.85□□□□□ -2.11
URB1O60287 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.85□□□□□ -2.11
URB1O60287 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
URB1O60287 ARL2BPP2-201ENST00000550907 489 ntBASIC1.85□□□□□ -2.11
URB1O60287 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.85□□□□□ -2.11
URB1O60287 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.85□□□□□ -2.11
URB1O60287 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
URB1O60287 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
URB1O60287 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.85□□□□□ -2.11
URB1O60287 MTND4P35-201ENST00000604257 1375 ntBASIC1.84□□□□□ -2.11
URB1O60287 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
URB1O60287 SNORD114-26-201ENST00000363543 72 ntBASIC1.84□□□□□ -2.11
URB1O60287 SNORD108-201ENST00000459332 71 ntBASIC1.84□□□□□ -2.11
URB1O60287 TRAV31-201ENST00000502780 342 ntBASIC1.84□□□□□ -2.11
URB1O60287 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.84□□□□□ -2.11
URB1O60287 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
URB1O60287 AL161713.1-201ENST00000555538 145 ntBASIC1.84□□□□□ -2.11
URB1O60287 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.84□□□□□ -2.11
URB1O60287 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.84□□□□□ -2.11
URB1O60287 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
URB1O60287 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
URB1O60287 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.84□□□□□ -2.12
URB1O60287 AP000275.1-201ENST00000411943 390 ntBASIC1.84□□□□□ -2.12
URB1O60287 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.84□□□□□ -2.12
URB1O60287 USP9YP8-201ENST00000441913 500 ntBASIC1.84□□□□□ -2.12
URB1O60287 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.84□□□□□ -2.12
URB1O60287 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.84□□□□□ -2.12
URB1O60287 CASP3P1-201ENST00000446037 609 ntBASIC1.84□□□□□ -2.12
URB1O60287 AP000873.1-201ENST00000463987 400 ntBASIC1.84□□□□□ -2.12
URB1O60287 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.84□□□□□ -2.12
URB1O60287 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.84□□□□□ -2.12
URB1O60287 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.84□□□□□ -2.12
URB1O60287 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
URB1O60287 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
URB1O60287 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
URB1O60287 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
URB1O60287 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.83□□□□□ -2.12
URB1O60287 AL590762.3-201ENST00000436372 640 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.83□□□□□ -2.12
URB1O60287 HMGB3P30-201ENST00000457863 606 ntBASIC1.83□□□□□ -2.12
URB1O60287 SNRPGP3-201ENST00000469405 227 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.83□□□□□ -2.12
URB1O60287 NDUFA5P6-201ENST00000542110 379 ntBASIC1.83□□□□□ -2.12
URB1O60287 AL354943.1-201ENST00000572103 781 ntBASIC1.83□□□□□ -2.12
URB1O60287 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC004943.3-201ENST00000624116 600 ntBASIC1.83□□□□□ -2.12
URB1O60287 SNORA31-201ENST00000362607 130 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.83□□□□□ -2.12
URB1O60287 AC008173.1-201ENST00000418901 264 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.83□□□□□ -2.12
URB1O60287 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.83□□□□□ -2.12
URB1O60287 AL138787.1-202ENST00000437804 898 ntBASIC1.83□□□□□ -2.12
URB1O60287 AL138799.3-201ENST00000438968 350 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC004263.1-201ENST00000479327 332 ntBASIC1.83□□□□□ -2.12
URB1O60287 AC006270.2-201ENST00000578523 652 ntBASIC1.83□□□□□ -2.12
URB1O60287 RPL23AP61-201ENST00000623642 466 ntBASIC1.83□□□□□ -2.12
URB1O60287 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.82□□□□□ -2.12
URB1O60287 OR5H15-201ENST00000383696 930 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms