Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC083906.5-201ENST00000503722 328 ntBASIC2.53□□□□□ -2
SGCEO43556 RAC1P5-201ENST00000512182 576 ntBASIC2.53□□□□□ -2
SGCEO43556 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.53□□□□□ -2
SGCEO43556 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.53□□□□□ -2
SGCEO43556 HMGB1P1-201ENST00000522557 636 ntBASIC2.53□□□□□ -2
SGCEO43556 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.53□□□□□ -2
SGCEO43556 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.53□□□□□ -2
SGCEO43556 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SGCEO43556 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.53□□□□□ -2
SGCEO43556 AC083760.1-201ENST00000589621 670 ntBASIC2.53□□□□□ -2
SGCEO43556 GAS5-AS1-201ENST00000602767 694 ntBASIC2.53□□□□□ -2
SGCEO43556 AC079089.3-201ENST00000603094 673 ntBASIC2.53□□□□□ -2
SGCEO43556 U73023.1-201ENST00000603134 700 ntBASIC2.53□□□□□ -2
SGCEO43556 AC079791.1-201ENST00000605356 973 ntBASIC2.53□□□□□ -2
SGCEO43556 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
SGCEO43556 AL442067.2-201ENST00000614033 363 ntBASIC2.53□□□□□ -2
SGCEO43556 AC010338.1-201ENST00000621823 717 ntBASIC2.53□□□□□ -2
SGCEO43556 AC091953.5-201ENST00000622919 233 ntBASIC2.53□□□□□ -2
SGCEO43556 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SGCEO43556 RNU6-115P-201ENST00000364310 107 ntBASIC2.52□□□□□ -2.01
SGCEO43556 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SGCEO43556 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 MIR16-1-201ENST00000385271 89 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AL356057.2-201ENST00000403318 432 ntBASIC2.52□□□□□ -2.01
SGCEO43556 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.52□□□□□ -2.01
SGCEO43556 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 AC025181.1-201ENST00000477507 416 ntBASIC2.52□□□□□ -2.01
SGCEO43556 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SGCEO43556 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.52□□□□□ -2.01
SGCEO43556 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 AC006390.1-201ENST00000508068 283 ntBASIC2.52□□□□□ -2.01
SGCEO43556 RNU6-27P-201ENST00000516146 107 ntBASIC2.52□□□□□ -2.01
SGCEO43556 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 AC104229.1-201ENST00000561364 255 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.52□□□□□ -2.01
SGCEO43556 MIR3609-201ENST00000582661 80 ntBASIC2.52□□□□□ -2.01
SGCEO43556 MIR4325-201ENST00000583049 90 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.52□□□□□ -2.01
SGCEO43556 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AC012443.1-201ENST00000605605 231 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.52□□□□□ -2.01
SGCEO43556 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.52□□□□□ -2.01
SGCEO43556 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
SGCEO43556 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SGCEO43556 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
SGCEO43556 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SGCEO43556 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
SGCEO43556 GDI2P1-201ENST00000429312 1336 ntBASIC2.51□□□□□ -2.01
SGCEO43556 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SGCEO43556 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SGCEO43556 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SGCEO43556 RPL9P7-201ENST00000330965 580 ntBASIC2.51□□□□□ -2.01
SGCEO43556 RNU1-140P-201ENST00000365040 165 ntBASIC2.51□□□□□ -2.01
SGCEO43556 ARF4P3-201ENST00000397387 509 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AL024474.1-201ENST00000404655 591 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AL590004.2-201ENST00000404787 371 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AL513477.1-202ENST00000417061 214 ntBASIC2.51□□□□□ -2.01
SGCEO43556 RPL35AP12-201ENST00000425362 338 ntBASIC2.51□□□□□ -2.01
SGCEO43556 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
SGCEO43556 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
SGCEO43556 SNRPGP6-201ENST00000451124 220 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.51□□□□□ -2.01
SGCEO43556 AC090525.1-201ENST00000479116 478 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC011352.3-201ENST00000505162 593 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC006445.2-201ENST00000510061 472 ntBASIC2.51□□□□□ -2.01
SGCEO43556 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.51□□□□□ -2.01
SGCEO43556 SNORA70.16-201ENST00000516390 95 ntBASIC2.51□□□□□ -2.01
SGCEO43556 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.51□□□□□ -2.01
SGCEO43556 AP000867.2-201ENST00000532468 320 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC128657.1-201ENST00000549459 145 ntBASIC2.51□□□□□ -2.01
SGCEO43556 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SGCEO43556 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.51□□□□□ -2.01
SGCEO43556 AL450270.1-201ENST00000606160 391 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.51□□□□□ -2.01
SGCEO43556 AC090115.4-201ENST00000609970 188 ntBASIC2.51□□□□□ -2.01
SGCEO43556 ATP5A1P2-202ENST00000616464 443 ntBASIC2.51□□□□□ -2.01
SGCEO43556 AC091925.2-201ENST00000625059 256 ntBASIC2.51□□□□□ -2.01
SGCEO43556 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SGCEO43556 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SGCEO43556 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SGCEO43556 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SGCEO43556 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SGCEO43556 ZNF519P1-201ENST00000449011 1626 ntBASIC2.5□□□□□ -2.01
SGCEO43556 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SGCEO43556 AC026241.1-201ENST00000517873 2142 ntBASIC2.5□□□□□ -2.01
SGCEO43556 AC008432.1-201ENST00000615912 1320 ntBASIC2.5□□□□□ -2.01
SGCEO43556 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.5□□□□□ -2.01
SGCEO43556 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.5□□□□□ -2.01
SGCEO43556 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SGCEO43556 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SGCEO43556 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SGCEO43556 MIR208A-201ENST00000362287 71 ntBASIC2.5□□□□□ -2.01
SGCEO43556 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
SGCEO43556 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SGCEO43556 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SGCEO43556 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.5□□□□□ -2.01
SGCEO43556 VN1R42P-201ENST00000424651 344 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms