Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 LINC01613-201ENST00000561476 2780 ntBASIC4.41□□□□□ -1.7
PAX4O43316 Y_RNA.569-201ENST00000384749 103 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RNU6-700P-201ENST00000391043 107 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RNA5SP498-201ENST00000411342 120 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AL390729.2-201ENST00000416137 156 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RPL30P13-201ENST00000418873 348 ntBASIC4.41□□□□□ -1.7
PAX4O43316 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 AC093166.3-201ENST00000448785 303 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RPL23AP15-201ENST00000450202 459 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.41□□□□□ -1.7
PAX4O43316 RNU7-138P-201ENST00000459479 64 ntBASIC4.41□□□□□ -1.7
PAX4O43316 SNRPCP3-201ENST00000474888 476 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AP000926.1-201ENST00000479573 241 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RPL21P103-201ENST00000479921 488 ntBASIC4.41□□□□□ -1.7
PAX4O43316 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.41□□□□□ -1.7
PAX4O43316 AC093853.1-201ENST00000515689 483 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.41□□□□□ -1.7
PAX4O43316 OR10G5P-201ENST00000532733 358 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 MIR4659A-201ENST00000580269 81 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC023043.3-201ENST00000593113 385 ntBASIC4.41□□□□□ -1.7
PAX4O43316 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.41□□□□□ -1.7
PAX4O43316 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.41□□□□□ -1.7
PAX4O43316 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC062037.1-201ENST00000605302 128 ntBASIC4.41□□□□□ -1.7
PAX4O43316 RNU6-85P-201ENST00000605989 107 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC005828.6-201ENST00000606610 232 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC069234.4-201ENST00000621276 412 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AC099654.15-201ENST00000639802 509 ntBASIC4.41□□□□□ -1.7
PAX4O43316 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.41□□□□□ -1.7
PAX4O43316 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 ZNF299P-201ENST00000406845 1804 ntBASIC4.41□□□□□ -1.7
PAX4O43316 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.41□□□□□ -1.7
PAX4O43316 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.41□□□□□ -1.7
PAX4O43316 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.41□□□□□ -1.7
PAX4O43316 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PAX4O43316 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PAX4O43316 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 SHQ1P1-201ENST00000437111 1544 ntBASIC4.41□□□□□ -1.7
PAX4O43316 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PAX4O43316 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.41□□□□□ -1.7
PAX4O43316 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.4□□□□□ -1.7
PAX4O43316 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PAX4O43316 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PAX4O43316 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PAX4O43316 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 UBE2WP1-201ENST00000362030 340 ntBASIC4.4□□□□□ -1.71
PAX4O43316 RNU6-312P-201ENST00000364629 107 ntBASIC4.4□□□□□ -1.71
PAX4O43316 RNU6-294P-201ENST00000364999 102 ntBASIC4.4□□□□□ -1.71
PAX4O43316 SMIM11P1-201ENST00000369586 178 ntBASIC4.4□□□□□ -1.71
PAX4O43316 LCN1P2-201ENST00000372030 223 ntBASIC4.4□□□□□ -1.71
PAX4O43316 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PAX4O43316 SNORA70.9-201ENST00000384370 135 ntBASIC4.4□□□□□ -1.71
PAX4O43316 RNY3P4-201ENST00000384428 101 ntBASIC4.4□□□□□ -1.71
PAX4O43316 OR3A2-201ENST00000408891 1076 ntBASIC4.4□□□□□ -1.71
PAX4O43316 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 LINC00328-2P-201ENST00000436585 219 ntBASIC4.4□□□□□ -1.71
PAX4O43316 RPL23AP74-201ENST00000437246 471 ntBASIC4.4□□□□□ -1.71
PAX4O43316 NOP56P2-201ENST00000447491 769 ntBASIC4.4□□□□□ -1.71
PAX4O43316 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.4□□□□□ -1.71
PAX4O43316 RPL23AP71-201ENST00000470966 469 ntBASIC4.4□□□□□ -1.71
PAX4O43316 RN7SL165P-201ENST00000477476 291 ntBASIC4.4□□□□□ -1.71
PAX4O43316 AC113367.2-201ENST00000505749 160 ntBASIC4.4□□□□□ -1.71
PAX4O43316 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.4□□□□□ -1.71
PAX4O43316 RNU6-1012P-201ENST00000516606 109 ntBASIC4.4□□□□□ -1.71
PAX4O43316 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.4□□□□□ -1.71
PAX4O43316 SUMO2P18-201ENST00000518873 252 ntBASIC4.4□□□□□ -1.71
PAX4O43316 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.4□□□□□ -1.71
PAX4O43316 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.4□□□□□ -1.71
PAX4O43316 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.4□□□□□ -1.71
PAX4O43316 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 AC015819.1-201ENST00000613588 663 ntBASIC4.4□□□□□ -1.71
PAX4O43316 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.4□□□□□ -1.71
PAX4O43316 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PAX4O43316 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 AL138820.1-201ENST00000617901 5305 ntBASIC4.4□□□□□ -1.71
PAX4O43316 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.4□□□□□ -1.71
PAX4O43316 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.4□□□□□ -1.71
PAX4O43316 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PAX4O43316 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PAX4O43316 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.4□□□□□ -1.71
PAX4O43316 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PAX4O43316 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms