Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB3O15347 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGB3O15347 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HMGB3O15347 USP9YP20-201ENST00000419224 558 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGB3O15347 AC234781.2-201ENST00000426370 994 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC091390.3-201ENST00000426478 338 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC009414.1-201ENST00000427200 443 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 EZH2P1-201ENST00000431167 291 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGB3O15347 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGB3O15347 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB3O15347 AC233279.1-201ENST00000455300 423 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC092798.1-201ENST00000458542 409 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 RPL31P41-201ENST00000477967 372 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC093663.2-201ENST00000484625 313 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 AC090543.1-201ENST00000492168 485 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 RPS27P26-201ENST00000494583 239 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB3O15347 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB3O15347 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 PSMA2P1-201ENST00000526365 646 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 OR8K4P-201ENST00000534608 872 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.04□□□□□ -2.08
HMGB3O15347 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGB3O15347 AC027104.1-201ENST00000563702 681 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGB3O15347 AC068722.2-201ENST00000618734 544 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGB3O15347 U6.105-201ENST00000637379 88 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HMGB3O15347 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC012321.1-201ENST00000561622 1588 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGB3O15347 RNU1-51P-201ENST00000365345 176 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 U8.8-201ENST00000365399 135 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 SNORA9-201ENST00000384215 133 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 MIR200C-201ENST00000384980 68 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AL162578.1-201ENST00000406202 378 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 SNORA11C-201ENST00000408532 129 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC069157.1-201ENST00000421749 137 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGB3O15347 OR4K11P-201ENST00000431829 904 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AL445687.1-201ENST00000439946 251 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 RAD1P2-201ENST00000446414 663 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGB3O15347 MTCO2P9-201ENST00000503214 694 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGB3O15347 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGB3O15347 VN1R104P-201ENST00000505115 1009 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.03□□□□□ -2.08
HMGB3O15347 RN7SKP157-201ENST00000516174 282 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGB3O15347 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC007954.1-201ENST00000554198 494 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC105137.2-201ENST00000569073 466 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB3O15347 AC079089.3-201ENST00000603094 673 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC119501.1-201ENST00000603646 475 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 ELOCP35-201ENST00000604289 336 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 ATP5A1P2-202ENST00000616464 443 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 LINC00216-201ENST00000623548 1126 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AP006248.3-201ENST00000623580 594 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC040168.1-201ENST00000623594 991 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGB3O15347 CYP3A51P-201ENST00000633513 256 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 SDAD1P2-201ENST00000441308 2028 ntBASIC2.03□□□□□ -2.08
HMGB3O15347 AC111188.2-201ENST00000529697 1387 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGB3O15347 RNU6-461P-201ENST00000364195 107 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 RNU6-198P-201ENST00000384258 104 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 MIR183-201ENST00000384958 110 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 U3.29-201ENST00000391296 212 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 RNA5SP120-201ENST00000410900 112 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AL050321.1-201ENST00000432363 400 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.02□□□□□ -2.09
HMGB3O15347 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGB3O15347 UBE2V1P13-201ENST00000436983 439 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AC004866.2-201ENST00000438285 481 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC002456.2-201ENST00000509356 380 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGB3O15347 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGB3O15347 CASP1P1-201ENST00000526345 212 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms