Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 RNU6-116P-201ENST00000384042 109 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 MIR3065-201ENST00000390137 79 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 RPL36AP36-201ENST00000418616 301 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC099677.1-201ENST00000420575 175 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AL513174.1-201ENST00000423182 629 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AL132765.1-201ENST00000434165 553 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM38O00635 USP9YP7-201ENST00000436723 430 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 USP9YP32-201ENST00000452432 430 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 OR6K1P-201ENST00000456766 971 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC116337.2-201ENST00000477662 156 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 FAM92A1P2-202ENST00000504766 877 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM38O00635 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 OR8R1P-201ENST00000543943 764 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM38O00635 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 AC091489.2-201ENST00000566263 604 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM38O00635 AC022916.3-201ENST00000592961 742 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AL117336.2-201ENST00000602435 335 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 BCRP9-201ENST00000605312 388 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AL356585.4-201ENST00000623078 1229 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 AC140479.6-201ENST00000633535 357 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 OR5H6-203ENST00000642105 978 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 AC139769.1-204ENST00000472297 1931 ntBASIC4.3□□□□□ -1.72
TRIM38O00635 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM38O00635 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM38O00635 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM38O00635 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM38O00635 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 AL365440.1-201ENST00000436135 2167 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC016588.2-201ENST00000632484 3021 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM38O00635 OR11H4-201ENST00000315409 1082 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 Y_RNA.97-201ENST00000363094 102 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 MIR23B-201ENST00000384832 97 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 SNORD115-47-201ENST00000391226 86 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AL356421.1-201ENST00000403255 413 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 RNA5SP39-201ENST00000411245 120 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM38O00635 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC109583.1-201ENST00000432156 268 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 MTND3P21-201ENST00000433774 331 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC108734.1-201ENST00000439549 399 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 DNAJC19P4-201ENST00000440115 345 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 HSFY6P-201ENST00000445573 403 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AL451050.1-201ENST00000450126 415 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 BTF3P5-201ENST00000457252 467 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 HMGB3P30-201ENST00000457863 606 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 RPL21P129-201ENST00000491732 478 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC008958.1-201ENST00000511047 682 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC108064.1-201ENST00000513791 460 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 RNU6-506P-201ENST00000516553 94 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM38O00635 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM38O00635 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM38O00635 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM38O00635 AC044792.1-201ENST00000593294 196 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC005255.1-201ENST00000593748 216 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 PRELID3BP8-201ENST00000604148 295 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC103710.4-201ENST00000609301 899 ntBASIC4.29□□□□□ -1.72
TRIM38O00635 AC064836.2-201ENST00000609491 462 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms