Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL138726.1-201ENST00000614873 333 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AL136313.1-201ENST00000624804 202 ntBASIC5.41□□□□□ -1.54
SOX1O00570 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX1O00570 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.41□□□□□ -1.54
SOX1O00570 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX1O00570 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SOX1O00570 KPNA2P1-201ENST00000458289 1591 ntBASIC5.41□□□□□ -1.54
SOX1O00570 TPTE2P4-201ENST00000258589 1605 ntBASIC5.41□□□□□ -1.54
SOX1O00570 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.41□□□□□ -1.54
SOX1O00570 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 AL359955.1-201ENST00000455242 3275 ntBASIC5.4□□□□□ -1.54
SOX1O00570 MAPK10-263ENST00000641052 4307 ntBASIC5.4□□□□□ -1.54
SOX1O00570 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 API5P2-201ENST00000397055 1498 ntBASIC5.4□□□□□ -1.54
SOX1O00570 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX1O00570 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
SOX1O00570 SNORD3E-201ENST00000362899 217 ntBASIC5.4□□□□□ -1.54
SOX1O00570 RNU6-960P-201ENST00000364056 120 ntBASIC5.4□□□□□ -1.54
SOX1O00570 Y_RNA.463-201ENST00000384271 102 ntBASIC5.4□□□□□ -1.54
SOX1O00570 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SOX1O00570 RNU6-328P-201ENST00000390887 106 ntBASIC5.4□□□□□ -1.54
SOX1O00570 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.4□□□□□ -1.54
SOX1O00570 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.4□□□□□ -1.54
SOX1O00570 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX1O00570 NUTF2P3-201ENST00000448540 384 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 AL162388.1-201ENST00000450912 352 ntBASIC5.4□□□□□ -1.54
SOX1O00570 SNORD97-201ENST00000459187 142 ntBASIC5.4□□□□□ -1.54
SOX1O00570 RPL21P93-201ENST00000480465 489 ntBASIC5.4□□□□□ -1.54
SOX1O00570 GLUD1P3-202ENST00000508551 200 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC008526.1-201ENST00000509149 338 ntBASIC5.4□□□□□ -1.54
SOX1O00570 HIGD1AP13-201ENST00000509878 289 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX1O00570 SNORA31.9-201ENST00000516429 84 ntBASIC5.4□□□□□ -1.54
SOX1O00570 RNU6-798P-201ENST00000516912 103 ntBASIC5.4□□□□□ -1.54
SOX1O00570 RNU1-45P-201ENST00000517191 141 ntBASIC5.4□□□□□ -1.54
SOX1O00570 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX1O00570 AC092470.1-201ENST00000546187 132 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX1O00570 MIR4433B-201ENST00000581329 102 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC006115.2-201ENST00000596823 202 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AC008814.1-201ENST00000603797 406 ntBASIC5.4□□□□□ -1.54
SOX1O00570 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 AC006157.1-201ENST00000611750 366 ntBASIC5.4□□□□□ -1.54
SOX1O00570 MIR6864-201ENST00000617935 70 ntBASIC5.4□□□□□ -1.54
SOX1O00570 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX1O00570 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
SOX1O00570 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.4□□□□□ -1.55
SOX1O00570 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.4□□□□□ -1.55
SOX1O00570 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX1O00570 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
SOX1O00570 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 SET-203ENST00000372688 801 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 Y_RNA.556-201ENST00000384677 113 ntBASIC5.39□□□□□ -1.55
SOX1O00570 Y_RNA.574-201ENST00000384766 95 ntBASIC5.39□□□□□ -1.55
SOX1O00570 RNU4-6P-201ENST00000410804 122 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 RPL23AP38-201ENST00000423801 469 ntBASIC5.39□□□□□ -1.55
SOX1O00570 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX1O00570 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX1O00570 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX1O00570 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 RPL7P28-201ENST00000437739 740 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms