Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.79□□□□□ -2.12
HMGN4O00479 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 IGLV3-17-201ENST00000519099 244 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 HMGN1P28-201ENST00000521340 364 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMGN4O00479 OR11H5P-201ENST00000554039 926 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 ACTR3BP3-201ENST00000565577 979 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGN4O00479 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC069304.3-201ENST00000603938 1084 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC068313.1-201ENST00000604028 1008 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AL391834.1-201ENST00000609609 560 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGN4O00479 NF1P10-201ENST00000613227 742 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 AL136981.2-201ENST00000617319 734 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGN4O00479 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HMGN4O00479 AC010680.1-201ENST00000590024 3590 ntBASIC1.79□□□□□ -2.12
HMGN4O00479 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.12
HMGN4O00479 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HMGN4O00479 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.78□□□□□ -2.12
HMGN4O00479 AP001350.1-201ENST00000601906 1524 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 DEFB109C-201ENST00000382575 264 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 DEFB109B-201ENST00000382656 264 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 RNU2-20P-201ENST00000410425 191 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 TOMM22P1-201ENST00000418578 312 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 EIF1AXP1-201ENST00000419267 435 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 SRIP2-201ENST00000428470 166 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 UBE2DNL-203ENST00000474922 222 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 RPL7L1P13-201ENST00000511702 739 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 RNU6-1073P-201ENST00000517182 106 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 AC007115.1-201ENST00000546853 234 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 AMZ2P1-203ENST00000565833 850 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGN4O00479 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
HMGN4O00479 AC019159.1-201ENST00000605094 187 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
HMGN4O00479 AL590099.1-201ENST00000615276 138 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.78□□□□□ -2.12
HMGN4O00479 AC244517.12-201ENST00000623581 663 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 AC010149.2-201ENST00000637608 315 ntBASIC1.78□□□□□ -2.12
HMGN4O00479 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
HMGN4O00479 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMGN4O00479 MTCO1P24-201ENST00000515438 1558 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HMGN4O00479 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
HMGN4O00479 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMGN4O00479 ZNF355P-201ENST00000427301 3216 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 RNA5SP508-201ENST00000411327 119 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.77□□□□□ -2.13
HMGN4O00479 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGN4O00479 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HMGN4O00479 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.77□□□□□ -2.13
HMGN4O00479 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGN4O00479 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
HMGN4O00479 AC090096.1-201ENST00000489168 390 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 RPL37P25-201ENST00000507308 276 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 NPM1P52-201ENST00000518264 846 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 DNAJC8P1-201ENST00000554535 372 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 HSPE1P14-201ENST00000605812 302 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGN4O00479 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HMGN4O00479 AC092650.2-201ENST00000619984 902 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 AP003122.6-201ENST00000623831 495 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGN4O00479 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.77□□□□□ -2.13
HMGN4O00479 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGN4O00479 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGN4O00479 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGN4O00479 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGN4O00479 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HMGN4O00479 RNU6-618P-201ENST00000363518 112 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 ANAPC10P1-201ENST00000395991 556 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AL356057.2-201ENST00000403318 432 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGN4O00479 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC010881.1-201ENST00000433830 235 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC023347.2-201ENST00000433994 462 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC004866.2-201ENST00000438285 481 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGN4O00479 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGN4O00479 AL513343.1-201ENST00000451818 792 ntBASIC1.76□□□□□ -2.13
HMGN4O00479 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGN4O00479 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGN4O00479 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HMGN4O00479 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGN4O00479 AL049838.1-201ENST00000563647 981 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms