Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.08□□□□□ -1.92
AP3B1O00203 AC015688.2-201ENST00000584523 262 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 AC010620.2-201ENST00000600135 313 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 AL606834.2-201ENST00000602954 668 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 AC092954.1-201ENST00000609121 445 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 MIR6798-201ENST00000612887 67 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.08□□□□□ -1.92
AP3B1O00203 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
AP3B1O00203 AC008669.1-201ENST00000565823 2178 ntBASIC3.08□□□□□ -1.92
AP3B1O00203 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.08□□□□□ -1.92
AP3B1O00203 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
AP3B1O00203 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
AP3B1O00203 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
AP3B1O00203 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
AP3B1O00203 SNORA63.1-201ENST00000362493 131 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 RNU6-1066P-201ENST00000363573 105 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 RNA5SP267-201ENST00000364893 126 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 ARF4P3-201ENST00000397387 509 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AL513477.1-202ENST00000417061 214 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AL356320.2-201ENST00000417263 507 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.07□□□□□ -1.92
AP3B1O00203 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.07□□□□□ -1.92
AP3B1O00203 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AC024082.2-201ENST00000434771 238 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.07□□□□□ -1.92
AP3B1O00203 AL049714.1-201ENST00000466686 347 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AC078857.1-201ENST00000469870 667 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 RN7SL499P-201ENST00000481141 276 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
AP3B1O00203 SNORA48.10-201ENST00000516965 160 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 RN7SKP272-201ENST00000516988 232 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 OR5AK1P-201ENST00000524837 922 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.07□□□□□ -1.92
AP3B1O00203 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.07□□□□□ -1.92
AP3B1O00203 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.07□□□□□ -1.92
AP3B1O00203 MIR4666A-201ENST00000580160 79 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AC026741.1-201ENST00000605892 482 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.07□□□□□ -1.92
AP3B1O00203 AC080188.3-201ENST00000624842 748 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 MTCO1P4-201ENST00000520516 1409 ntBASIC3.07□□□□□ -1.92
AP3B1O00203 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
AP3B1O00203 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.07□□□□□ -1.92
AP3B1O00203 MIR22-201ENST00000362190 85 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 RNU6-492P-201ENST00000363035 104 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3B1O00203 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 RPL7L1P10-201ENST00000427790 463 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 PSMA6P3-201ENST00000428242 164 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 ARL4AP4-201ENST00000434170 518 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC092573.2-201ENST00000434546 243 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3B1O00203 SEPT14P24-201ENST00000447236 180 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 VN1R34P-201ENST00000447387 883 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 SNORA84-201ENST00000459229 133 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3B1O00203 RPS17P11-201ENST00000474297 293 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 RPL30P5-201ENST00000494923 336 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 PRELID3BP6-201ENST00000503839 571 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 COX7A2P2-201ENST00000505291 250 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 HSPD1P15-201ENST00000505573 1122 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3B1O00203 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.06□□□□□ -1.92
AP3B1O00203 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 HSPE1P20-201ENST00000538133 289 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC128657.1-201ENST00000549459 145 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC009812.4-201ENST00000569134 1805 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.06□□□□□ -1.92
AP3B1O00203 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3B1O00203 MIR5004-201ENST00000579078 107 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 UBL5P2-201ENST00000583788 219 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3B1O00203 AC008739.2-201ENST00000597006 317 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 TUG1_1.1-201ENST00000610654 145 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3B1O00203 AC100793.4-201ENST00000613683 429 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AC004696.1-201ENST00000614345 607 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 LRRC77P-213ENST00000637727 880 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 AL163152.1-201ENST00000642001 374 ntBASIC3.06□□□□□ -1.92
AP3B1O00203 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
AP3B1O00203 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
AP3B1O00203 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3B1O00203 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
AP3B1O00203 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 HMGB1P5-201ENST00000255320 642 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3B1O00203 ATP5F1P3-201ENST00000397213 657 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RNU2-43P-201ENST00000410306 190 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
AP3B1O00203 RNU6-575P-201ENST00000411326 105 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms