Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR4325-201ENST00000583049 90 ntBASIC3.53□□□□□ -1.84
DDX39AO00148 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX39AO00148 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX39AO00148 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX39AO00148 CRYM-AS1-204ENST00000637983 556 ntBASIC3.53□□□□□ -1.84
DDX39AO00148 AC013437.2-201ENST00000639587 677 ntBASIC3.53□□□□□ -1.84
DDX39AO00148 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX39AO00148 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX39AO00148 CUL1P1-201ENST00000509510 2425 ntBASIC3.53□□□□□ -1.84
DDX39AO00148 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
DDX39AO00148 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX39AO00148 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 TAB3P1-202ENST00000452645 1634 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC097714.1-201ENST00000511272 1647 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
DDX39AO00148 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 RPS4XP5-202ENST00000449995 1334 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC109315.1-201ENST00000584143 1347 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
DDX39AO00148 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 MIR493-201ENST00000385254 89 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AL354719.1-201ENST00000406535 843 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 MTATP6P27-201ENST00000416987 621 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX39AO00148 HMGB3P6-201ENST00000444896 598 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 RAC1P7-201ENST00000445367 377 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 OR6K5P-201ENST00000447050 945 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX39AO00148 AC090453.1-201ENST00000495560 436 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX39AO00148 TMEM251P1-201ENST00000503717 318 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 DSTNP2-201ENST00000504533 515 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC113347.3-201ENST00000509113 148 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX39AO00148 AC112206.4-201ENST00000515142 405 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 RNU6-276P-201ENST00000516114 96 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC009812.2-201ENST00000517657 457 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX39AO00148 AL365503.1-201ENST00000605247 905 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AL365400.2-201ENST00000605604 902 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC016877.3-201ENST00000606778 504 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC099778.2-201ENST00000610904 211 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX39AO00148 AC025588.4-201ENST00000615802 908 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
DDX39AO00148 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX39AO00148 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX39AO00148 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX39AO00148 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX39AO00148 RNU6-1122P-201ENST00000384449 107 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
DDX39AO00148 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX39AO00148 SSXP9-201ENST00000417503 292 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 BEND7P1-201ENST00000422058 457 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 USP9YP36-201ENST00000424581 829 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 MTATP6P4-201ENST00000427725 675 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AL590233.1-201ENST00000430017 456 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX39AO00148 MTND2P20-201ENST00000440805 661 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AC016696.1-201ENST00000446949 318 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX39AO00148 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX39AO00148 MTCO3P11-201ENST00000455103 774 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AC004801.2-202ENST00000463559 283 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX39AO00148 AC114981.1-201ENST00000503897 678 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX39AO00148 MTND4LP22-201ENST00000508209 276 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 RN7SKP31-201ENST00000516354 278 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX39AO00148 HSPA8P13-201ENST00000523715 472 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 FAM60DP-201ENST00000524174 632 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
DDX39AO00148 AC009220.3-201ENST00000604318 586 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 TUG1_1.1-201ENST00000610654 145 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AC243773.3-201ENST00000613270 256 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX39AO00148 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX39AO00148 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
DDX39AO00148 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
DDX39AO00148 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX39AO00148 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.5□□□□□ -1.85
DDX39AO00148 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX39AO00148 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX39AO00148 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
DDX39AO00148 RPS4XP3-201ENST00000398541 413 ntBASIC3.5□□□□□ -1.85
DDX39AO00148 AL356131.1-201ENST00000405826 414 ntBASIC3.5□□□□□ -1.85
DDX39AO00148 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.5□□□□□ -1.85
DDX39AO00148 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX39AO00148 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX39AO00148 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms