Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AP000403.1-201ENST00000603349 851 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL022161.1-201ENST00000604390 213 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC092354.1-201ENST00000606057 376 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL031775.1-201ENST00000607014 887 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL592295.2-201ENST00000612578 206 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL590099.1-201ENST00000615276 138 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL356585.4-201ENST00000623078 1229 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC026422.1-201ENST00000623961 452 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 CRYM-AS1-204ENST00000637983 556 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC092447.10-201ENST00000620607 1652 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRC53A6NM62 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRC53A6NM62 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRC53A6NM62 RNU6-853P-201ENST00000364306 107 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 U8.14-201ENST00000390843 143 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL138880.1-201ENST00000405824 642 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 NPM1P49-201ENST00000448027 714 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC092754.2-201ENST00000463506 460 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC017037.2-201ENST00000513850 890 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 RNU6-1095P-201ENST00000516148 108 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 MIR2116-201ENST00000517221 80 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 MTCYBP41-201ENST00000528913 1123 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 CR383656.7-201ENST00000548164 174 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 TGIF1P1-201ENST00000558095 802 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC034268.2-201ENST00000571784 482 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AP005136.1-201ENST00000579765 429 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 MIR4307-201ENST00000582802 84 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 PIGPP4-201ENST00000584447 307 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC008507.1-201ENST00000587506 734 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL590229.1-201ENST00000603497 542 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AL157700.1-201ENST00000561973 1432 ntBASIC3.84□□□□□ -1.79
LRRC53A6NM62 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRC53A6NM62 AC006378.2-201ENST00000623178 2476 ntBASIC3.84□□□□□ -1.8
LRRC53A6NM62 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRRC53A6NM62 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 MIR30E-201ENST00000362104 92 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 RNU6-97P-201ENST00000363387 104 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 MTCYBP36-201ENST00000404146 440 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC068533.1-201ENST00000418542 415 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 RPS27AP14-201ENST00000422868 454 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC53A6NM62 TRIM60P18-201ENST00000441518 828 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 GDI2P2-201ENST00000445131 608 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 HMGB1P22-201ENST00000505315 124 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC117532.1-201ENST00000514638 323 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 RNU2-27P-201ENST00000516185 142 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 RNA5SP309-201ENST00000516670 106 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC060788.1-201ENST00000521318 469 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 AP004242.1-201ENST00000533701 349 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC091489.2-201ENST00000566263 604 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC53A6NM62 PRELID3BP8-201ENST00000604148 295 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AL358072.1-201ENST00000604156 575 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC112187.2-201ENST00000604345 283 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AL049634.3-201ENST00000604968 457 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC53A6NM62 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 AC119674.1-207ENST00000641355 633 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 AL513185.3-201ENST00000433335 1300 ntBASIC3.83□□□□□ -1.8
LRRC53A6NM62 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC53A6NM62 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC53A6NM62 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC53A6NM62 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms