Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC010928.2-201ENST00000588017 287 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL451007.1-201ENST00000595491 289 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 VN1R90P-201ENST00000595717 726 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 SNORA35B-201ENST00000607417 129 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC012150.2-201ENST00000621300 544 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC024023.1-201ENST00000624530 922 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 CR392039.4-201ENST00000624968 501 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 MIR219B-201ENST00000637023 88 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 FAM133CP-201ENST00000332869 704 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 SNORD23.1-201ENST00000408212 104 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 RPS20P15-201ENST00000412792 311 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 PTP4A1P7-201ENST00000423476 514 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 RPL35AP22-201ENST00000436855 335 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 BZW1P2-201ENST00000473537 826 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 GAPDHP39-201ENST00000481866 979 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 RPL30P11-201ENST00000495304 339 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC026801.2-201ENST00000515352 425 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC022690.1-201ENST00000526681 550 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC019227.1-201ENST00000526902 510 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 CENPUP2-201ENST00000555897 1186 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 MIR4319-201ENST00000577285 85 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 MIR5089-201ENST00000580047 84 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 MIR3944-201ENST00000581277 108 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 FAM106CP-201ENST00000582212 507 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC007448.1-201ENST00000582714 234 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC008739.2-201ENST00000597006 317 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC024220.1-201ENST00000603675 484 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC116618.1-201ENST00000634617 774 ntBASIC1.32□□□□□ -2.2
LINC01549A6NIU2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01549A6NIU2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 RNU6-50P-201ENST00000362356 103 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 SNORA16B-201ENST00000364674 135 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AL135786.1-201ENST00000415892 214 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 PGBD4P6-201ENST00000421501 610 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 UBE2V1P6-201ENST00000430840 422 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 IFNA20P-201ENST00000436840 528 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 Z99127.2-201ENST00000441426 334 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 XKRY2-201ENST00000442362 1093 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 HIGD1AP2-201ENST00000446367 280 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 RPS3AP14-201ENST00000483907 780 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC034222.1-201ENST00000494052 532 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 CR383656.14-201ENST00000551951 406 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 OR4U1P-201ENST00000554958 912 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC022884.3-201ENST00000579571 248 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC090312.2-201ENST00000582687 378 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC017100.2-201ENST00000584628 355 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 NRBF2P5-201ENST00000603087 788 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 KATNBL1P1-201ENST00000605192 748 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC020658.4-201ENST00000613987 684 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AL356266.1-201ENST00000623311 483 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01549A6NIU2 AC073346.2-201ENST00000624724 2058 ntBASIC1.31□□□□□ -2.2
LINC01549A6NIU2 ZNF90P1-201ENST00000480493 1951 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 RNA5SP363-201ENST00000365072 115 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 MIR676-201ENST00000390702 67 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 RNU2-17P-201ENST00000410290 190 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 VN1R51P-201ENST00000411675 945 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 NPM1P11-201ENST00000417106 855 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AL606495.1-201ENST00000422100 813 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AL445685.2-201ENST00000422551 342 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AL513175.1-201ENST00000431492 780 ntBASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC01549A6NIU2 AL109933.2-201ENST00000452651 260 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms