Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AL121834.1-202ENST00000404494 277 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL354868.1-201ENST00000417077 482 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 RPL12P34-201ENST00000424532 479 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 ARL2BPP10-201ENST00000446487 531 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL135752.1-201ENST00000479477 471 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 RPL21P93-201ENST00000480465 489 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 RNU6-685P-201ENST00000517088 95 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 IGKV2D-36-201ENST00000518643 226 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC103783.1-201ENST00000520506 373 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC006254.3-201ENST00000603353 884 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC007938.3-201ENST00000604965 623 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC083806.3-201ENST00000614016 455 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC098657.3-201ENST00000620434 263 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 SAGE2P-201ENST00000420011 2126 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 MAPK10-263ENST00000641052 4307 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AC000374.1-201ENST00000434698 1745 ntBASIC6.08□□□□□ -1.44
USP17L3A6NCW0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
USP17L3A6NCW0 AL137003.2-201ENST00000606924 2538 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL359922.3-201ENST00000624779 1670 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZNF519P1-201ENST00000449011 1626 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 Y_RNA.135-201ENST00000363439 95 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 RNU6-821P-201ENST00000390995 107 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 SNORA77-201ENST00000408716 125 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ATG3P1-201ENST00000419507 911 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 PDSS1P1-201ENST00000422953 1114 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 RPL30P3-201ENST00000424262 333 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 MTCYBP10-201ENST00000424905 650 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 RPL7AP49-201ENST00000429522 581 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL591438.1-201ENST00000433508 581 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL162388.1-201ENST00000450912 352 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC007967.1-201ENST00000455422 1159 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC008526.1-201ENST00000509149 338 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL117187.1-201ENST00000555482 181 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 MIR3668-201ENST00000582138 75 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 MIR5096-201ENST00000583713 70 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL138889.2-201ENST00000603883 242 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 U2.17-201ENST00000611454 95 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC083809.1-201ENST00000615051 472 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AC010378.1-201ENST00000619270 362 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 MTND4P1-201ENST00000457501 1466 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 DDX10P1-201ENST00000448545 1933 ntBASIC6.07□□□□□ -1.44
USP17L3A6NCW0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP17L3A6NCW0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.06□□□□□ -1.44
USP17L3A6NCW0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.06□□□□□ -1.44
USP17L3A6NCW0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.06□□□□□ -1.44
USP17L3A6NCW0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.06□□□□□ -1.44
USP17L3A6NCW0 PABPC1P7-201ENST00000413177 1513 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.06□□□□□ -1.44
USP17L3A6NCW0 AL049641.1-201ENST00000441055 1948 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 Y_RNA.148-201ENST00000363557 117 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 RNA5SP223-201ENST00000365174 120 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 RNU6-1040P-201ENST00000383974 107 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 RNU6-574P-201ENST00000384265 107 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 RNA5SP332-201ENST00000391063 115 ntBASIC6.06□□□□□ -1.44
USP17L3A6NCW0 MIR450B-201ENST00000401182 78 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms