Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC025768.1-201ENST00000510057 267 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC234778.2-201ENST00000566241 354 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 MTCO2P22-201ENST00000603246 681 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC024220.1-201ENST00000603675 484 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AL590099.1-201ENST00000615276 138 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC104307.1-201ENST00000616142 196 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC006963.1-201ENST00000624003 1052 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 AC073346.2-201ENST00000624724 2058 ntBASIC1.89□□□□□ -2.11
TCRBV3S1A0A5B6 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC114973.1-201ENST00000429057 632 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 RPL31P20-201ENST00000449593 360 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 MRPL42P6-201ENST00000486397 371 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 MTCO1P47-201ENST00000523889 1271 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC090616.3-201ENST00000582184 217 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC008739.2-201ENST00000597006 317 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 NRBF2P5-201ENST00000603087 788 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC120053.1-201ENST00000607706 736 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 AC079597.1-201ENST00000624306 508 ntBASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TCRBV3S1A0A5B6 MTND5P6-201ENST00000422338 1798 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 Y_RNA.62-201ENST00000362840 99 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP252-201ENST00000391131 119 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 ATF1P1-201ENST00000406040 927 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 NUP35P2-201ENST00000416748 943 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC096571.1-202ENST00000506634 735 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC114322.1-201ENST00000506771 926 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 RNA5SP356-201ENST00000515972 94 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 SNRPGP18-201ENST00000553000 214 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 AC012468.1-201ENST00000604888 430 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 U73479.1-201ENST00000618062 168 ntBASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TCRBV3S1A0A5B6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AL359715.4-201ENST00000606629 1436 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 SET-203ENST00000372688 801 ntTSL 2 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 SNORA36C-201ENST00000384289 132 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 SNORD65-201ENST00000391079 73 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AL030996.1-201ENST00000411430 235 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 RPL26P37-201ENST00000411983 438 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 MED6P1-201ENST00000439659 713 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AL121871.1-201ENST00000443413 436 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 OR6C72P-201ENST00000451403 892 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC022493.1-201ENST00000492984 337 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC016550.3-201ENST00000515706 767 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 OR5AQ1P-201ENST00000527596 927 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AC053481.3-201ENST00000577881 843 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 GLUD1P4-201ENST00000590914 418 ntBASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TCRBV3S1A0A5B6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms