Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AP003122.5-201ENST00000527668 3766 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 MIR1289-1-201ENST00000408836 144 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 RNU2-28P-201ENST00000410457 189 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 MTCO2P8-201ENST00000412213 658 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC112653.1-201ENST00000443851 386 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 MTCO1P48-201ENST00000448024 1096 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AL031313.1-201ENST00000448435 256 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC013828.1-201ENST00000481845 158 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AP001025.2-201ENST00000490908 477 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC021146.5-201ENST00000503544 545 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 MTCYBP16-201ENST00000509187 1129 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 RN7SKP31-201ENST00000516354 278 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC087808.1-201ENST00000520501 361 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC068657.1-201ENST00000520807 306 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AP000889.1-201ENST00000530968 660 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC079600.2-201ENST00000550076 130 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LSM6P2-201ENST00000552208 177 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 MTCYBP27-201ENST00000555160 670 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC024257.5-201ENST00000612739 531 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AL590240.3-201ENST00000621416 943 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC073348.1-201ENST00000623002 331 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 OR1S1-201ENST00000624470 978 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC009039.2-201ENST00000624524 529 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 LINC02211-204ENST00000642024 1070 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AC116096.1-201ENST00000566804 2314 ntBASIC3.07□□□□□ -1.92
SMIM28A0A1B0GU29 AL355596.1-201ENST00000565399 3996 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-600P-201ENST00000362524 99 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-335P-201ENST00000364563 113 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 SNORA51.6-201ENST00000384151 125 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-1242P-201ENST00000391052 103 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC016769.3-201ENST00000396562 315 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RNU2-42P-201ENST00000410697 113 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AL592148.1-201ENST00000413568 445 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RPL23AP76-201ENST00000441860 458 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RPL23AP44-201ENST00000482216 473 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 OR4G11P-201ENST00000492842 939 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 NIPA2P2-201ENST00000496376 1083 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RPL21P131-201ENST00000497298 483 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 SCARNA1-201ENST00000517138 166 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AP001189.2-201ENST00000527320 189 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC106754.1-201ENST00000562632 1513 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AL049838.1-201ENST00000563647 981 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 MIR4509-3-201ENST00000578671 94 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 MIR4509-2-201ENST00000583920 94 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 BNIP3P40-201ENST00000596017 556 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 ATP1B3P1-201ENST00000605365 821 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AL021368.2-201ENST00000606125 5352 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 MIR4509-1-201ENST00000618224 94 ntBASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.06□□□□□ -1.92
SMIM28A0A1B0GU29 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms