Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC092474.3-201ENST00000603022 568 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 DUXAP3-201ENST00000603616 594 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 MIR6076-201ENST00000617521 113 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 CTSLP2-204ENST00000629029 392 ntBASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAV27A0A087WT01 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RNU6-98P-201ENST00000384173 107 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 MIR627-201ENST00000384979 97 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RNU6-837P-201ENST00000391056 108 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AL122016.1-201ENST00000403365 367 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 OR4K6P-201ENST00000416478 897 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RPL21P32-201ENST00000419877 477 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RNA5SP310-201ENST00000459084 116 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 snoU13.3-201ENST00000459441 104 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC104687.1-201ENST00000485829 412 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC107222.1-201ENST00000510899 637 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RAC1P5-201ENST00000512182 576 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC008562.1-201ENST00000521763 330 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 COX6B1P6-201ENST00000522347 255 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 OR4R1P-201ENST00000529879 463 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 GLUD1P4-201ENST00000590914 418 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC103881.1-201ENST00000603476 538 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC009570.1-201ENST00000609599 745 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 AC135776.4-201ENST00000624300 1904 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 ZNF734P-201ENST00000419494 1534 ntBASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV27A0A087WT01 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV27A0A087WT01 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 RNA5SP289-201ENST00000362332 137 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 RNU6-263P-201ENST00000363811 107 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV27A0A087WT01 SNORA67.4-201ENST00000384688 142 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 RNA5SP252-201ENST00000391131 119 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 PRRC2CP1-201ENST00000404428 159 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 HMGB1P11-201ENST00000413899 637 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC015908.1-201ENST00000478739 476 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 RPL30P14-201ENST00000482744 348 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AP000926.3-201ENST00000497201 299 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 GZMAP1-201ENST00000503054 631 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC111193.1-201ENST00000504097 155 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 NAMPTP2-201ENST00000505629 1115 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC008716.1-201ENST00000511084 513 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV27A0A087WT01 LY96-202ENST00000518893 430 ntTSL 3 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2□□□□□ -2.09
TRAV27A0A087WT01 AP001646.1-201ENST00000527936 915 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC106782.4-201ENST00000568264 210 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 DNAJC19P3-201ENST00000594491 331 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 U73023.1-201ENST00000603134 700 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AL009028.1-201ENST00000604895 802 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC013562.2-201ENST00000611632 603 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC012321.1-201ENST00000561622 1588 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 AC093536.2-201ENST00000565257 1406 ntBASIC2□□□□□ -2.09
TRAV27A0A087WT01 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AL359893.1-201ENST00000447628 1580 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC011460.1-201ENST00000636268 1834 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 RNU6-670P-201ENST00000364312 104 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 RNU4-31P-201ENST00000384211 141 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 SNORA36C-201ENST00000384289 132 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC010385.1-201ENST00000412374 256 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
TRAV27A0A087WT01 KATNBL1P4-201ENST00000503545 918 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms