Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RPL36AP33-201ENST00000450395 310 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC099563.1-201ENST00000456086 418 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC097493.1-201ENST00000463958 372 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC092757.1-201ENST00000467293 467 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC104986.1-201ENST00000517978 436 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 OR4R3P-201ENST00000525084 838 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC012213.3-201ENST00000577199 777 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC103710.3-201ENST00000608157 948 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC013562.2-201ENST00000611632 603 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC243773.3-201ENST00000613270 256 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC090116.1-201ENST00000615679 446 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC009878.1-201ENST00000621819 340 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC231657.1-201ENST00000624313 397 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 AC090582.1-201ENST00000636321 199 ntBASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SNX9Q9Y5X1 DDX43P2-201ENST00000604753 1354 ntBASIC3.9□□□□□ -1.78
SNX9Q9Y5X1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SNX9Q9Y5X1 AC007823.1-201ENST00000569932 1566 ntBASIC3.9□□□□□ -1.78
SNX9Q9Y5X1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.9□□□□□ -1.78
SNX9Q9Y5X1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 RNU6-462P-201ENST00000362659 105 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 MED14P1-201ENST00000430517 648 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 UBE2FP3-201ENST00000436366 524 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 COX6CP2-201ENST00000444980 225 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 HMGB3P8-201ENST00000449709 577 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 HMGN2P7-201ENST00000456186 273 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC010301.1-201ENST00000473936 355 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC091965.2-201ENST00000512324 613 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC016065.2-201ENST00000514530 444 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC239860.2-201ENST00000525886 270 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AP002963.1-201ENST00000530590 184 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 MIR5047-201ENST00000579212 100 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 U73023.1-201ENST00000603134 700 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AC010591.1-201ENST00000603941 649 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 SNORA51-201ENST00000606420 132 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AL356596.1-201ENST00000624230 379 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 AL161912.2-201ENST00000565707 3007 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX9Q9Y5X1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 SNORD9-201ENST00000362566 104 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 RNU6-723P-201ENST00000383973 107 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 SNORA51.6-201ENST00000384151 125 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 Y_RNA.505-201ENST00000384489 102 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 HMGN2P8-201ENST00000391458 268 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC069218.2-201ENST00000411665 344 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 RPL30P2-201ENST00000414021 291 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC069157.1-201ENST00000421749 137 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 HSPD1P21-201ENST00000436541 245 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 RPL23AP16-201ENST00000441715 421 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 VN1R34P-201ENST00000447387 883 ntBASIC3.89□□□□□ -1.79
SNX9Q9Y5X1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms