Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RN7SKP234-201ENST00000517173 224 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC135001.1-201ENST00000544546 283 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC007424.1-203ENST00000554613 687 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AL157687.1-201ENST00000554853 619 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 NRBF2P1-201ENST00000587407 859 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC008752.3-201ENST00000588113 712 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BCRP9-201ENST00000605312 388 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RNU4-89P-201ENST00000607443 133 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC012150.2-201ENST00000621300 544 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC004009.2-201ENST00000623016 728 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AL445363.3-201ENST00000623080 671 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 NMD3P1-201ENST00000439704 1488 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-181P-201ENST00000363225 107 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 U8.3-201ENST00000363321 132 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.813-201ENST00000364639 102 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-534P-201ENST00000364877 106 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNA5SP146-201ENST00000410743 123 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-195P-201ENST00000411352 109 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC092832.1-201ENST00000422934 400 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RPL37P1-201ENST00000432310 284 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 SNRPGP5-201ENST00000456003 220 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AMD1P1-201ENST00000457220 922 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AP000852.1-201ENST00000472460 573 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RPS29P19-201ENST00000479709 171 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC025465.4-201ENST00000513422 638 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 Vault.1-201ENST00000516474 102 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNA5SP73-201ENST00000516744 108 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 MTND1P35-201ENST00000526739 508 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AL157394.1-201ENST00000562983 1224 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AC090616.5-202ENST00000582111 297 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 C8orf59P2-201ENST00000603441 271 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AL020991.1-201ENST00000612314 373 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AL161637.1-201ENST00000622380 412 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 C2orf27A-204ENST00000623058 969 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RNA5SP196-201ENST00000625967 102 ntBASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
CTDP1Q9Y5B0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 AP002907.1-201ENST00000606361 1430 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-356P-201ENST00000384140 107 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 SNORA70E-201ENST00000384492 135 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 MIR153-1-201ENST00000384914 90 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-1009P-201ENST00000390996 107 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 PRRC2CP1-201ENST00000404428 159 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 MTCO1P17-201ENST00000411522 491 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 RPS3AP9-201ENST00000417027 792 ntBASIC4.92□□□□□ -1.62
CTDP1Q9Y5B0 PIGFP2-201ENST00000421400 651 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms