Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC096644.2-201ENST00000429278 159 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 USP9YP16-201ENST00000430287 407 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 RPL7P28-201ENST00000437739 740 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 CYCSP24-201ENST00000445119 316 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 PPIAP3-201ENST00000450588 505 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 RPL10P17-201ENST00000453852 316 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 USP9YP23-201ENST00000455085 407 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 RPL12P25-201ENST00000455592 494 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 RN7SL172P-201ENST00000460535 303 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 Y_RNA.661-201ENST00000516003 99 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 MIR4293-201ENST00000584305 78 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 BNIP3P16-201ENST00000589779 534 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 AC104623.2-202ENST00000623477 4002 ntBASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SALL4Q9UJQ4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC109780.1-201ENST00000451768 1344 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AL031119.1-201ENST00000404707 1879 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC007529.1-201ENST00000418574 2178 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC103710.2-202ENST00000641454 2853 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RNU6-562P-201ENST00000362731 107 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 U3.3-201ENST00000362986 216 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 Y_RNA.252-201ENST00000364556 101 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RNA5SP90-201ENST00000364801 99 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 SNORD3H-201ENST00000384486 214 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 Y_RNA.527-201ENST00000384573 102 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 U3.29-201ENST00000391296 212 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 HSPA8P15-201ENST00000401676 786 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC009302.1-201ENST00000417147 390 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 EI24P4-201ENST00000423683 1078 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RPL7L1P9-201ENST00000431298 745 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 Z98949.2-201ENST00000440996 144 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RPS15AP27-201ENST00000449183 343 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RPS27AP1-201ENST00000475545 471 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 TRBV1-201ENST00000476502 284 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RPS21P4-201ENST00000487122 248 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC016065.2-201ENST00000514530 444 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RNU6-27P-201ENST00000516146 107 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RNU6-1016P-201ENST00000516689 94 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RNU6-1271P-201ENST00000517049 105 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC044860.2-201ENST00000561005 179 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC009852.2-201ENST00000567898 485 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 MIR3941-201ENST00000582572 103 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AL355812.1-201ENST00000603215 216 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC006157.1-201ENST00000611750 366 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC011890.2-201ENST00000613393 294 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 MIR6128-201ENST00000615528 109 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AC007485.1-201ENST00000616755 206 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 AP001784.1-201ENST00000624107 428 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 OR55B1P-203ENST00000641518 2602 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 PNPT1P2-201ENST00000456768 2050 ntBASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SALL4Q9UJQ4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SALL4Q9UJQ4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms