Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 FRG1CP-201ENST00000358464 769 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNU5F-6P-201ENST00000362979 116 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 SNORA51.6-201ENST00000384151 125 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNU6-1226P-201ENST00000384317 107 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNY3P10-201ENST00000384764 102 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC016769.3-201ENST00000396562 315 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 DEFB108C-201ENST00000400154 252 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 MTCYBP36-201ENST00000404146 440 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RN7SKP56-201ENST00000410513 331 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL133384.1-201ENST00000412744 351 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 MTCO1P21-201ENST00000416634 589 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 NUP35P2-201ENST00000416748 943 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL512649.1-201ENST00000428997 581 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 MTND4P6-201ENST00000438297 472 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RPS24P1-201ENST00000438550 371 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC092641.1-201ENST00000440229 772 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL831737.1-201ENST00000441288 271 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 BMI1P1-201ENST00000445879 941 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 PDSS1P2-201ENST00000449397 678 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNU7-136P-201ENST00000458819 69 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC114981.1-201ENST00000503897 678 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC110768.1-201ENST00000509222 400 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC010625.1-201ENST00000511296 403 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNA5SP216-201ENST00000516111 123 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 OR5AP1P-201ENST00000529730 940 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 OR4A45P-201ENST00000529954 901 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC007458.1-201ENST00000542812 373 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC107016.1-201ENST00000550463 337 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 LSM6P2-201ENST00000552208 177 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL391156.1-201ENST00000554965 554 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL121576.1-201ENST00000556055 276 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC053481.3-201ENST00000577881 843 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC068790.6-201ENST00000602558 258 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC078795.2-201ENST00000602835 1252 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC004987.4-201ENST00000603383 338 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC068276.1-201ENST00000605793 379 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC103710.4-201ENST00000609301 899 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC068722.2-201ENST00000618734 544 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AL713922.2-201ENST00000619384 716 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 AC244258.1-201ENST00000637553 1071 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
SIX4Q9UIU6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 RNU6-1243P-201ENST00000364028 107 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 HMGB1P11-201ENST00000413899 637 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 AC245052.5-201ENST00000416320 649 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 USP9YP28-201ENST00000435142 589 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 ST13P20-201ENST00000447996 1065 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 AC104073.1-201ENST00000451988 151 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
SIX4Q9UIU6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX4Q9UIU6 AC026410.2-201ENST00000460281 156 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms