Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.57□□□□□ -2
SCN11AQ9UI33 AL445685.2-201ENST00000422551 342 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.57□□□□□ -2
SCN11AQ9UI33 AL591719.1-201ENST00000444669 744 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 AC022431.1-201ENST00000450941 438 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.57□□□□□ -2
SCN11AQ9UI33 AC104435.1-201ENST00000483483 166 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.57□□□□□ -2
SCN11AQ9UI33 AL359198.2-201ENST00000611836 194 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
SCN11AQ9UI33 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
SCN11AQ9UI33 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.57□□□□□ -2
SCN11AQ9UI33 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.57□□□□□ -2
SCN11AQ9UI33 AP005901.5-201ENST00000545779 1796 ntBASIC2.57□□□□□ -2
SCN11AQ9UI33 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
SCN11AQ9UI33 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SCN11AQ9UI33 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCN11AQ9UI33 RNA5SP167-201ENST00000365461 116 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.56□□□□□ -2
SCN11AQ9UI33 MTND4LP13-201ENST00000425022 298 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 MTCO3P30-201ENST00000426425 670 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.56□□□□□ -2
SCN11AQ9UI33 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.56□□□□□ -2
SCN11AQ9UI33 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.56□□□□□ -2
SCN11AQ9UI33 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.56□□□□□ -2
SCN11AQ9UI33 ELOCP13-201ENST00000443934 329 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.56□□□□□ -2
SCN11AQ9UI33 TAF9P1-201ENST00000445421 515 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 TAF9P2-201ENST00000454958 515 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 GZMAP1-201ENST00000503054 631 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 HMGB3P15-201ENST00000507326 574 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 Y_RNA.670-201ENST00000516255 105 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.56□□□□□ -2
SCN11AQ9UI33 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SCN11AQ9UI33 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCN11AQ9UI33 U3.15-201ENST00000365398 212 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.56□□□□□ -2
SCN11AQ9UI33 Y_RNA.540-201ENST00000384638 111 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.56□□□□□ -2
SCN11AQ9UI33 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.56□□□□□ -2
SCN11AQ9UI33 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.56□□□□□ -2
SCN11AQ9UI33 GTF2IP9-201ENST00000502460 301 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.56□□□□□ -2
SCN11AQ9UI33 MTND5P4-201ENST00000514978 288 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AC123786.2-201ENST00000603459 275 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.6-201ENST00000603753 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.11-201ENST00000604059 253 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.10-201ENST00000604330 253 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AC008162.1-201ENST00000604718 254 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.1-201ENST00000604752 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AP004372.1-201ENST00000604842 844 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.2-201ENST00000604983 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.5-201ENST00000605253 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.4-201ENST00000605279 254 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.12-201ENST00000605291 253 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.8-201ENST00000605353 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.9-201ENST00000605428 253 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AL670379.7-201ENST00000605823 252 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AC016877.3-201ENST00000606778 504 ntBASIC2.56□□□□□ -2
SCN11AQ9UI33 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 FAM35CP-201ENST00000554755 2470 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 MTND5P12-201ENST00000502851 1449 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 RPL23AP39-201ENST00000415533 405 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.55□□□□□ -2
SCN11AQ9UI33 HMGB3P10-201ENST00000434734 572 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 AL138799.3-201ENST00000438968 350 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.55□□□□□ -2
SCN11AQ9UI33 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.55□□□□□ -2
SCN11AQ9UI33 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.55□□□□□ -2
SCN11AQ9UI33 AC009318.3-201ENST00000616916 503 ntBASIC2.55□□□□□ -2
SCN11AQ9UI33 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCN11AQ9UI33 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN11AQ9UI33 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
SCN11AQ9UI33 MIR378A-201ENST00000362177 66 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 SNORA26.9-201ENST00000391322 122 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 BTBD10P2-201ENST00000404779 676 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 DPPA2P1-201ENST00000428060 556 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 NDUFA5P4-201ENST00000436704 385 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 RPS26P30-201ENST00000443431 335 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 RPL34P26-201ENST00000445636 354 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC093392.2-201ENST00000450682 337 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 FABP5P13-201ENST00000452144 328 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC104308.1-201ENST00000454621 333 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AP000852.1-201ENST00000472460 573 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC087190.1-201ENST00000484462 480 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC098799.2-201ENST00000509466 868 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 MTCO1P30-201ENST00000515244 580 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC011611.5-201ENST00000552477 578 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SCN11AQ9UI33 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.54□□□□□ -2
SCN11AQ9UI33 AC068790.3-201ENST00000602988 553 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC073387.2-201ENST00000604797 784 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms