Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 MTCO3P44-201ENST00000510977 541 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RNU6-885P-201ENST00000516607 104 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RNA5SP468-201ENST00000516782 93 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 snoZ278.1-201ENST00000517059 112 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 Y_RNA.717-201ENST00000517106 92 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC093519.1-201ENST00000566109 298 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 MIR4506-201ENST00000584693 77 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AL669831.4-202ENST00000590817 238 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AP000238.1-201ENST00000608759 426 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AP005137.2-201ENST00000609238 400 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC124016.2-201ENST00000610058 665 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC008264.2-201ENST00000610193 3731 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 OR5H2-201ENST00000355273 945 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 SNORA71.1-201ENST00000364523 117 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RNU6-730P-201ENST00000383954 104 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RNU6-629P-201ENST00000384061 103 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MIR217-201ENST00000384817 110 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MCTS2P-201ENST00000394552 546 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC110754.1-201ENST00000399740 601 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AL133384.1-201ENST00000412744 351 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC245054.2-201ENST00000415639 319 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 VPS26BP1-201ENST00000417155 755 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC006548.1-201ENST00000427470 102 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RPL21P40-201ENST00000428586 483 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RPL31P54-201ENST00000429803 370 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC005345.1-201ENST00000431868 217 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC241584.1-201ENST00000438469 1241 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RPL23AP16-201ENST00000441715 421 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 HMGB3P6-201ENST00000444896 598 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MTCYBP11-201ENST00000447254 1109 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC244505.3-201ENST00000454598 187 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MTCO3P2-201ENST00000457365 171 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AP001486.1-201ENST00000463339 476 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RNA5SP385-201ENST00000515947 110 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 ZNF705CP-201ENST00000530515 889 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MTND1P24-201ENST00000552175 861 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 MTND3P12-201ENST00000559068 328 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC090666.1-201ENST00000578241 445 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC068620.3-201ENST00000602749 560 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AL109653.1-201ENST00000603091 248 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC025588.3-201ENST00000604182 274 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AF129408.1-201ENST00000608767 431 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 CR381572.1-201ENST00000625098 102 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC099654.9-201ENST00000637055 678 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 AC099654.8-201ENST00000637757 681 ntBASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLIP2Q9UDT6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC103988.1-201ENST00000566382 2177 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 DEFB109C-201ENST00000382575 264 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 DEFB109B-201ENST00000382656 264 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 SNORA44-201ENST00000384584 132 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 RNU1-101P-201ENST00000391171 127 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 RPL5P18-201ENST00000406671 891 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AL023807.1-201ENST00000407932 359 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC093392.2-201ENST00000450682 337 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 NECAP1P2-201ENST00000455668 727 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC080014.1-201ENST00000496877 1201 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 HMGB1P22-201ENST00000505315 124 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 MTCYBP37-201ENST00000510642 1133 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 RNU1-61P-201ENST00000516107 151 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC023632.1-201ENST00000518463 375 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms