Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.93□□□□□ -2.1
CHD7Q9P2D1 AC107021.2-201ENST00000567714 2095 ntBASIC1.93□□□□□ -2.1
CHD7Q9P2D1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHD7Q9P2D1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.93□□□□□ -2.1
CHD7Q9P2D1 MIR6073-201ENST00000352083 89 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AIMP1P1-201ENST00000418670 937 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AC093151.1-201ENST00000427711 313 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL845331.3-202ENST00000562856 261 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 NF1P5-201ENST00000588287 448 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL139286.1-201ENST00000604465 483 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL137159.1-201ENST00000452808 512 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 MTCYBP19-201ENST00000517463 1124 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL138799.3-201ENST00000438968 350 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL121594.1-201ENST00000475906 575 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.92□□□□□ -2.1
CHD7Q9P2D1 RNA5SP102-201ENST00000516865 106 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AC074140.1-201ENST00000621617 208 ntBASIC1.92□□□□□ -2.1
CHD7Q9P2D1 AL450326.2-201ENST00000421913 1962 ntBASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC012498.1-201ENST00000424037 437 ntBASIC1.91□□□□□ -2.1
CHD7Q9P2D1 RPL7P37-201ENST00000425095 738 ntBASIC1.91□□□□□ -2.1
CHD7Q9P2D1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.91□□□□□ -2.1
CHD7Q9P2D1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AL035411.2-201ENST00000604022 421 ntBASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHD7Q9P2D1 AL592437.2-201ENST00000421655 2434 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AL513331.1-201ENST00000411908 397 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 ARPC3P1-201ENST00000437218 533 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 RPS15AP17-201ENST00000470598 390 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.1
CHD7Q9P2D1 ARL4AP2-201ENST00000507378 601 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AC024560.3-201ENST00000608482 349 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 AC016590.3-201ENST00000611171 753 ntBASIC1.9□□□□□ -2.1
CHD7Q9P2D1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.9□□□□□ -2.11
CHD7Q9P2D1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD7Q9P2D1 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHD7Q9P2D1 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
CHD7Q9P2D1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.9□□□□□ -2.11
CHD7Q9P2D1 MTCO3P31-201ENST00000405526 789 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 SNRPFP4-201ENST00000456366 242 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC108734.3-201ENST00000481241 1165 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 RPS26P24-201ENST00000497656 331 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 RNA5SP220-201ENST00000516298 104 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC004486.1-201ENST00000546846 233 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AL161670.1-201ENST00000554348 137 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 MTND5P35-201ENST00000557537 1720 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC013404.1-201ENST00000413068 249 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD7Q9P2D1 MIR3186-201ENST00000577404 85 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 MIR4452-201ENST00000583004 71 ntBASIC1.89□□□□□ -2.11
CHD7Q9P2D1 AC066616.2-201ENST00000559334 1481 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD7Q9P2D1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 USP9YP15-201ENST00000442391 422 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 RPL21P134-201ENST00000453468 483 ntBASIC1.88□□□□□ -2.11
CHD7Q9P2D1 AC126118.1-201ENST00000607744 628 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms