Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNY1P10-201ENST00000363268 113 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AL627390.1-201ENST00000396055 340 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AF274854.1-201ENST00000413236 615 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 RPL34P26-201ENST00000445636 354 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC098583.1-201ENST00000480875 255 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC108078.2-201ENST00000510750 236 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 SNORA31.26-201ENST00000517250 137 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC126177.3-201ENST00000551839 688 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC068790.3-201ENST00000602988 553 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AL139276.1-201ENST00000311910 1001 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 MIR518E-201ENST00000385252 88 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 NCSTNP1-201ENST00000406229 144 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 RNU4-62P-201ENST00000410125 130 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 MTCO3P30-201ENST00000426425 670 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC007182.2-201ENST00000489251 402 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 SNORD39.2-201ENST00000579995 76 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 PSMA6P4-201ENST00000603247 718 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 SNRPGP19-201ENST00000603826 189 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC012531.5-201ENST00000611375 151 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC091046.2-201ENST00000620775 665 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 AC084768.2-201ENST00000622736 221 ntBASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PHRF1Q9P1Y6 API5P2-201ENST00000397055 1498 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 RNA5SP190-201ENST00000365222 118 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AP1B1P2-201ENST00000416196 106 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC005517.2-201ENST00000424673 553 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AP000852.1-201ENST00000472460 573 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 RNA5SP309-201ENST00000516670 106 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC104986.1-201ENST00000517978 436 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC010809.3-201ENST00000621310 641 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 OR1S1-201ENST00000624470 978 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC138649.5-201ENST00000637456 137 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 AC244517.1-201ENST00000606030 2086 ntBASIC2.62□□□□□ -1.99
PHRF1Q9P1Y6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 AC009302.1-201ENST00000417147 390 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 AL591719.1-201ENST00000444669 744 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 MTND4LP12-201ENST00000448237 295 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 RPL23AP63-201ENST00000498752 471 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 NAMPTP2-201ENST00000505629 1115 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 TTC39CP1-201ENST00000512513 755 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 ISCA1P3-201ENST00000577104 373 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 AC090897.3-201ENST00000636973 1157 ntBASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
PHRF1Q9P1Y6 HMGB3P10-201ENST00000434734 572 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC104435.1-201ENST00000483483 166 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 GZMAP1-201ENST00000503054 631 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 MIR3683-201ENST00000580847 82 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC048347.1-201ENST00000624621 427 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AP003385.6-201ENST00000531603 374 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 OR4T1P-201ENST00000554933 911 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 AC073387.2-201ENST00000604797 784 ntBASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.6□□□□□ -1.99
PHRF1Q9P1Y6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 SNORA25.9-201ENST00000365087 128 ntBASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 AC098799.2-201ENST00000509466 868 ntBASIC2.59□□□□□ -1.99
PHRF1Q9P1Y6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms