Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RN7SL283P-201ENST00000489055 303 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 IGJP1-201ENST00000522682 475 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL622P-201ENST00000585292 275 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 VN1R90P-201ENST00000595717 726 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AL035413.2-201ENST00000604801 525 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC013468.1-201ENST00000608680 598 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL853P-201ENST00000617250 223 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC106730.3-201ENST00000624568 641 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.88
HOXC10Q9NYD6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
HOXC10Q9NYD6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.34□□□□□ -1.88
HOXC10Q9NYD6 AC091564.4-201ENST00000533934 2194 ntBASIC3.34□□□□□ -1.88
HOXC10Q9NYD6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AL136360.1-201ENST00000503377 1900 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC016716.1-201ENST00000265882 708 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP383-201ENST00000362934 120 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL21P75-201ENST00000396599 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL21P28-201ENST00000401418 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AL592114.1-201ENST00000403842 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP80-201ENST00000410475 111 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 VN1R51P-201ENST00000411675 945 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL7P8-201ENST00000411964 730 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPS3AP9-201ENST00000417027 792 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC245291.1-201ENST00000419501 328 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 YWHAZP7-201ENST00000436906 631 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 YWHAZP8-201ENST00000436935 731 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 Z96811.1-201ENST00000445880 108 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL21P39-201ENST00000463605 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC011979.1-201ENST00000472300 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL21P93-201ENST00000480465 489 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC233702.1-201ENST00000482905 502 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC087190.1-201ENST00000484462 480 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC093591.1-201ENST00000491435 481 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RPL21P16-201ENST00000495531 483 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC009901.1-201ENST00000506703 541 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 RNU6-416P-201ENST00000516265 103 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC092470.1-201ENST00000546187 132 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC008507.1-201ENST00000587506 734 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC092474.3-201ENST00000603022 568 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 NRBF2P5-201ENST00000603087 788 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC098483.2-201ENST00000603158 454 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC084824.5-201ENST00000612009 413 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 AC099654.7-201ENST00000635788 2127 ntBASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC10Q9NYD6 MIR525-201ENST00000384978 85 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 RPL22P22-201ENST00000395439 379 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 MTATP6P19-201ENST00000413797 659 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 RAB11AP1-201ENST00000442978 646 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AL109933.2-201ENST00000452651 260 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC104057.1-201ENST00000515547 497 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC104986.1-201ENST00000517978 436 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 FAM60DP-201ENST00000524174 632 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 OR4R2P-201ENST00000530815 597 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC011611.5-201ENST00000552477 578 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC093510.2-201ENST00000562820 896 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC023824.3-201ENST00000569003 562 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AL627309.6-201ENST00000606857 840 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC016542.1-201ENST00000608259 493 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC10Q9NYD6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms