Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
KLHL28Q9NXS3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 OR1S2-201ENST00000302592 978 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RNU5D-1-201ENST00000363299 116 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 SUGT1P1-201ENST00000379514 476 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RNA5SP252-201ENST00000391131 119 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AL136372.1-201ENST00000403060 228 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RNU2-15P-201ENST00000410692 191 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 HMGN1P24-201ENST00000412282 298 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 OR4K6P-201ENST00000416478 897 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RPL7P30-201ENST00000420888 709 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC006028.1-201ENST00000438379 402 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC092393.1-201ENST00000439625 742 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 HMGB3P6-201ENST00000444896 598 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RN7SL504P-201ENST00000494496 287 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC110794.1-201ENST00000505816 425 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC027309.2-201ENST00000520566 192 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 CYB5AP5-201ENST00000549779 389 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 RPL21P12-201ENST00000559810 515 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC011471.1-201ENST00000585766 187 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC012493.2-201ENST00000595083 291 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 VN1R92P-201ENST00000598511 928 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC008759.3-201ENST00000613300 508 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC007275.1-201ENST00000621243 671 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC004972.1-201ENST00000623934 2209 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AP003122.5-201ENST00000527668 3766 ntBASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.96□□□□□ -1.94
KLHL28Q9NXS3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL365361.1-201ENST00000566942 3481 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 MTND5P24-201ENST00000438892 1767 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 U3.6-201ENST00000363622 211 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 RNU6-173P-201ENST00000364215 104 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 MIR493-201ENST00000385254 89 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL035405.1-201ENST00000400795 710 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 MIR1289-1-201ENST00000408836 144 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL024507.1-201ENST00000412741 274 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC245054.2-201ENST00000415639 319 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC092634.2-201ENST00000428146 1010 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL512649.1-201ENST00000428997 581 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 OR2B8P-201ENST00000432841 938 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 ELOCP23-201ENST00000452014 332 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC108860.1-201ENST00000484521 383 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 RPL21P13-201ENST00000488305 481 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC021678.1-201ENST00000505195 936 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC010625.1-201ENST00000511296 403 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AP003355.1-201ENST00000518956 587 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC068339.2-201ENST00000534395 618 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 LARP7P2-201ENST00000575306 125 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 GLUD1P4-201ENST00000590914 418 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 AC245036.5-201ENST00000596330 847 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 VN1R87P-201ENST00000596706 487 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 RPL23AP92-201ENST00000603609 255 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 YPEL5P2-201ENST00000605553 359 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
KLHL28Q9NXS3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AL513185.3-201ENST00000433335 1300 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 RNU6-1155P-201ENST00000363554 107 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 RNU6-878P-201ENST00000384578 110 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 RPL23AP69-201ENST00000431134 458 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC004866.2-201ENST00000438285 481 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 OR6K5P-201ENST00000447050 945 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AL589880.1-201ENST00000448271 287 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 RFC5P1-201ENST00000454419 874 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 Z82190.1-201ENST00000454534 490 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 AC244505.3-201ENST00000454598 187 ntBASIC2.94□□□□□ -1.94
KLHL28Q9NXS3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms