Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 RNU4-28P-201ENST00000364739 141 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 CYCSP45-201ENST00000402289 315 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC092447.6-201ENST00000414578 210 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 OR1AA1P-201ENST00000419597 916 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 BTF3P5-201ENST00000457252 467 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC010401.1-201ENST00000463867 348 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 VN1R17P-201ENST00000472048 1090 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 RPL7P18-201ENST00000478965 734 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL024509.2-201ENST00000493462 493 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC104090.1-201ENST00000506341 1171 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC112673.1-201ENST00000513168 575 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 APOOP4-201ENST00000513530 597 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 RN7SKP244-201ENST00000516513 307 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 EEF1A1P37-201ENST00000522748 715 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 ZNF192P1-203ENST00000565888 810 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC234772.3-201ENST00000602277 528 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL162713.1-201ENST00000604480 262 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL450489.1-201ENST00000612071 468 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC084757.4-201ENST00000616350 526 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL357080.1-201ENST00000617394 239 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AC011330.2-201ENST00000621680 635 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 AL049781.1-201ENST00000623195 3585 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RNU2-71P-201ENST00000411395 189 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC093578.1-201ENST00000415219 368 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 MTATP6P27-201ENST00000416987 621 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RPL22P18-201ENST00000417197 377 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RPL7P30-201ENST00000420888 709 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 MTCO2P5-201ENST00000422621 426 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC007742.1-201ENST00000425789 329 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RPL21P66-201ENST00000426566 466 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 YME1L1P1-201ENST00000429435 297 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AL590233.1-201ENST00000430017 456 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 BX679664.1-201ENST00000434429 253 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 ELOCP26-201ENST00000436067 329 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 HSPE1P28-201ENST00000443139 211 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 MTCO3P11-201ENST00000455103 774 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 snoU13.22-201ENST00000459428 104 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RPL21P10-201ENST00000463521 490 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 COX7A2P2-201ENST00000505291 250 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 Y_RNA.717-201ENST00000517106 92 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 MRPS36P3-201ENST00000519284 130 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 CYCSP2-201ENST00000558168 301 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC015917.1-201ENST00000579654 510 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 SNORD84-203ENST00000584275 78 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC015967.1-201ENST00000619893 476 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC231657.1-201ENST00000624313 397 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 AC048347.1-201ENST00000624621 427 ntBASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.26□□□□□ -1.73
SMC4Q9NTJ3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 ZNF876P-202ENST00000398732 1485 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 RNU6-83P-201ENST00000384568 112 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 TPMTP2-201ENST00000414372 726 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AL953862.1-201ENST00000423016 168 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 MTCYBP31-201ENST00000438855 1122 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 ATP5C1P1-201ENST00000441945 895 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC005297.2-201ENST00000450430 606 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms