Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU4-47P-201ENST00000410876 114 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 MRPS36P1-201ENST00000421291 307 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 RPL21P40-201ENST00000428586 483 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 NECAP1P2-201ENST00000455668 727 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC104164.3-201ENST00000467363 1258 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 RPL7P5-201ENST00000471472 736 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC108734.3-201ENST00000481241 1165 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC119751.4-201ENST00000507498 357 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 SNORA31.20-201ENST00000517111 133 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AL121603.1-201ENST00000553815 142 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 EIF4BP1-201ENST00000554881 351 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 BNIP3P38-201ENST00000601117 544 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC023158.2-201ENST00000614876 543 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AL121895.2-201ENST00000619558 447 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC010608.3-201ENST00000625048 527 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC099654.9-201ENST00000637055 678 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HPS4Q9NQG7 AC107982.1-201ENST00000507171 1300 ntBASIC3.41□□□□□ -1.86
HPS4Q9NQG7 CR383658.2-201ENST00000547576 1525 ntBASIC3.4□□□□□ -1.86
HPS4Q9NQG7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.86
HPS4Q9NQG7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RNU6-925P-201ENST00000384629 104 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 SKINT1L-201ENST00000401057 817 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RAD23BP2-201ENST00000416003 1207 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 MTND2P9-201ENST00000422293 931 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RSL24D1P3-201ENST00000449255 495 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RFC5P1-201ENST00000454419 874 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RPL27AP5-201ENST00000469428 449 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC010285.1-201ENST00000470580 392 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC109925.1-201ENST00000478069 331 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RPL21P131-201ENST00000497298 483 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RNU6-1225P-201ENST00000516336 65 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 RN7SKP31-201ENST00000516354 278 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC004024.1-201ENST00000549244 247 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC125611.1-201ENST00000549563 229 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC091057.3-201ENST00000602684 733 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC128687.1-201ENST00000605304 619 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 CYCSP41-201ENST00000616920 296 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AC018755.4-201ENST00000619715 454 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPS4Q9NQG7 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
HPS4Q9NQG7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RNU6-216P-201ENST00000363282 104 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RNU5D-1-201ENST00000363299 116 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AL450338.1-201ENST00000407987 512 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC012065.2-201ENST00000421295 375 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms