Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL356585.4-201ENST00000623078 1229 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 CYP3A51P-201ENST00000633513 256 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZNF849P-201ENST00000594711 1566 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AL139276.1-201ENST00000311910 1001 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 RNU6-657P-201ENST00000383904 107 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 RNU2-47P-201ENST00000410649 186 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 RNU6-575P-201ENST00000411326 105 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AF274854.1-201ENST00000413236 615 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AL513477.1-202ENST00000417061 214 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCX3AQ9NNX9 TAB3P1-202ENST00000452645 1634 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC091153.1-201ENST00000466297 402 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 SETP12-201ENST00000514068 805 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC092593.1-201ENST00000515413 1815 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCX3AQ9NNX9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 OR8R1P-201ENST00000543943 764 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC138915.1-201ENST00000565427 1685 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC011260.1-201ENST00000578420 472 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VCX3AQ9NNX9 AP002826.1-201ENST00000608835 315 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AL159169.3-201ENST00000608871 561 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCX3AQ9NNX9 VN1R7P-201ENST00000619242 903 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC244258.1-201ENST00000637553 1071 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 AC009093.8-201ENST00000641769 292 ntBASIC2.55□□□□□ -2
VCX3AQ9NNX9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.55□□□□□ -2
VCX3AQ9NNX9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCX3AQ9NNX9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC099654.7-201ENST00000635788 2127 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC009812.4-201ENST00000569134 1805 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC012321.1-201ENST00000561622 1588 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL672167.1-206ENST00000356293 943 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 RNU6-1197P-201ENST00000391183 107 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL355615.1-201ENST00000406187 641 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC245052.5-201ENST00000416320 649 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 TAF13P2-201ENST00000416876 286 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 RAC1P8-201ENST00000427086 527 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC044797.1-201ENST00000445744 679 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 RFC5P1-201ENST00000454419 874 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 MTND2P30-201ENST00000456663 382 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC106707.2-201ENST00000484182 374 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AP001317.1-201ENST00000531194 960 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC007115.1-201ENST00000546853 234 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 CKS1BP3-201ENST00000600888 237 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC002487.1-201ENST00000604565 994 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC008277.2-201ENST00000605196 797 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC097504.2-201ENST00000608088 454 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC024560.3-201ENST00000608482 349 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AP000254.1-201ENST00000609934 520 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 MIR6862-1-201ENST00000613016 70 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 MIR6862-2-201ENST00000614755 70 ntBASIC2.54□□□□□ -2
VCX3AQ9NNX9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VCX3AQ9NNX9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.54□□□□□ -2
VCX3AQ9NNX9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3AQ9NNX9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AP000526.1-201ENST00000603308 1388 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3AQ9NNX9 FRG1BP-201ENST00000278882 761 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 MIR135A2-201ENST00000384854 100 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms